Detailed information of evm.model.Ap14.1893 in Astrangia poculata

Genomic Location: Ap14:20649660...20660057
NR annotation: XP_020607468.1, transient receptor potential cation channel subfamily V member 5-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000582 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08016
all species →		PKD_channelPolycystin cation channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024862
all species →		FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR013122
all species →		DomainPolycystin cation channel, PKD1/PKD2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10582
all species →		TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1893.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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