Gene detail

Detailed information of evm.model.Ap14.1930 in Astrangia poculata

Genomic Location: Ap14:21101865...21119604
NR annotation: CAH3156809.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.1930

atgtcgataagatcggttttacgttgtctcctatttaaggacaaaagcaggccacttctaaagcgatcactgtgtcagctaagtcctcgaaaacctcaaaactgctctgcaattgctttttcttcaacggccgttttgctgacatgggatccgcctagcaaaagcactggagttcagaacaaaagaaatttctctattcactacagaccactgtattccaagggtaaattcacggttcttcacgtcggagcagtctctcacaaactgattgaaaatcttgatgttgtaacatattacgccttcaggattgtagccagagatcactcaggaaaacatgactactgtgaagttttagccaagacaatgagggatgctcagttttcagttcctttacaagtaagaccaataggcggaggtagacttggggtgaaaatggagtggaaagctgtgactttacaggacgcccagccaacctatcggttgtttatggagtggcaacataagggacaaatacatgtgcgattactctgcgaaacaaacgaaacgtcgtgtgaatttcttggaaaattaccatttcccaatagcatgtacgtaagcactgtagtggtgaaacaacctcacaagtttcaggccggaaacattcgctcctaccctacaaagaaggttttgatttcagaaattggaaagatacctagtaaaccagttcatgcaagcaacaagactcaagtactgaaagtttcagtcgataagcgtggctgggatttcgtcattctctcatggaataccataaatgcagcacgacctcacgtgacttacaaagtcacctctcaaggaggaaacaacattattgacaagatgacgtcaaacacctcagtgcttctctccggccttgatcagctgaccagatataaagtcaaagtgcaggctcaggaaaagactggtggctttttactcgcgtcggctgtggtcgttttcaacacaatagataaggatgagtgcatggaaatgtccaacatttgttccgatcactctgagtgtatgaataccagaggaagctatttttgtcgctgtcttccgggctggactggtgacggaaaaagctgcaaagaagtagacaaagaaaaccaaacgtattgtgacaaccacaactacgcaaacatcacgtggacgattacgtcacaagggaaaacggcgttgtcaccgtgtcctggtggaacaagaggtatcgccaaaagacgatgtttgcaagtttctagtggagatgcgaagtggggagttcctgacctcagtgaatgtgtctcagacaggatgttagatatcgcacaactgttggacgatcctgatgctgacgtcactgagattgccatgcaactggtcaacgtcaccgctgtctccacgcatgcgcaagctccattgcaaactggcgacctaaaattagctgttgacgtcatagggaagatttctgagaggagtctgaagataattcaacagcaataccctgatgctaccaagagagctgagaaagttcgagaaatcacccaggccgtggtgaaatcttccagcaacatcgtggacagcaaagctcttgaatcgtggaagtttatgccaaaggattctatggcggccgaagccagtaaactattaaaaggagtggataccactgctttgcatttggccaaaacagcactcacaagagatgccacagtatctgaggctccaaacgtcgtgttgagtgcaaaggcaatagaagacctcgatccatctgaccagcggatgccacccttacccagaaactccaggcccatagatgacgtgaccagcaaaatgcacaatgtcacatctagtgtcttgttaccaggctccgtgctcatgctgcaaaagaatgctagtgacccaagcacgactcattatataacatttgtgtccttccgtaacctcaaagcattgatgcaaccgattgcggacgacaaatctctagagccgtctgaagaaggaagtgacttgggaagaatagaatcagaaatcacatcagtttcattgcacccaatgaaaattaattattttgaggaacctgtcgtattaactcttaaaaacagtcagaatggcggcaaaggccaagcaagctgtgtattttggaatatatccggtcctcgtggtttctggtcagaagaaggttgttatttgacaaaaagcaattccagccataccacgtgtgaatgtgaccatctcacaagctttgctgtgctcatgcgcatagtagacatgccagacaatgacgtcatgaagaaacatcagtttgccttaagtctcatttcctacattggaatctctatttcaatcgtggctttatcaatatcatttcttaccttcacgtttctaaggtttagaaatacgcgtcaccgttattttgttcatgccaacttagcgctctccctgggtttagcggagactttgtttctctttggcatcacaaagacagcaaaccagataatctgtaaaaccatcgcgatcacactacactatctattcctggtgtcattctgttggatggcgctggaaggaatcgtcctatatctcttactcgtcaaaatcttccgctccaagactcggccagcgagagacagagctgtgtttttattttgtggctggggtatcccagctattgtagtgggtgggtctgctgtgttatttcatgaaggctacggaacagaggaattttgttggctatcttttgagagacatttcacctgggcgttcgtgggaccggtgcttcttgtatgcttgtttaacattatttgcttggtaaagacgtttatgattatgtcaactcgagggagcgttaaggatagcgacacgagcattgtgaaaataagatactgggctaaaggttgtgcgttactttcttgtcttcttggcctgacgtggattcttggagtttttgtagtaaatcaagaaaccatattcatggcatacctctttaatatattcaacacacttcagggattaatgatatttcttttccactgcgtcggagatgaaaaggtgcgcgcagaatatttacgtatactccgctgtcaaacacgctcgcaggcctacggcttagcccgtccgtggtggagtaagtccgactcgtttagccgttctagaacgtgggaagagaggaaactcagaagaagtactctacaatcaaacgttgaatctccgaagaccactcatggctcaattcaaagaaggactaacatcaatacaggcccagaagatatcactttacgagaaggaataaatcgaccaatggaaatgagccagatgtatggaataattgaagatgactgtgtacaaaataacgatgaaaccgagattcagcagacaacagagggattagagagtccgactgacacaggaaatcaggtggaaagctgtgaaccagaattaacacagaattccgaagaaagcactgaggcggaacctgaaccagttgaaaccggtttgacgtgttcttgtgaaagtgcatcacaacccaatctcccggatgtaatacagaatgactgcaaagacttcgataaagctgaaaataacagtgaggtctaa

Transcript

evm.model.Ap14.1930

ATGTCGATAAGATCGGTTTTACGTTGTCTCCTATTTAAGGACAAAAGCAGGCCACTTCTAAAGCGATCACTGTGTCAGCTAAGTCCTCGAAAACCTCAAAACTGCTCTGCAATTGCTTTTTCTTCAACGGCCGTTTTGCTGACATGGGATCCGCCTAGCAAAAGCACTGGAGTTCAGAACAAAAGAAATTTCTCTATTCACTACAGACCACTGTATTCCAAGGGTAAATTCACGGTTCTTCACGTCGGAGCAGTCTCTCACAAACTGATTGAAAATCTTGATGTTGTAACATATTACGCCTTCAGGATTGTAGCCAGAGATCACTCAGGAAAACATGACTACTGTGAAGTTTTAGCCAAGACAATGAGGGATGCTCAGTTTTCAGTTCCTTTACAAGTAAGACCAATAGGCGGAGGTAGACTTGGGGTGAAAATGGAGTGGAAAGCTGTGACTTTACAGGACGCCCAGCCAACCTATCGGTTGTTTATGGAGTGGCAACATAAGGGACAAATACATGTGCGATTACTCTGCGAAACAAACGAAACGTCGTGTGAATTTCTTGGAAAATTACCATTTCCCAATAGCATGTACGTAAGCACTGTAGTGGTGAAACAACCTCACAAGTTTCAGGCCGGAAACATTCGCTCCTACCCTACAAAGAAGGTTTTGATTTCAGAAATTGGAAAGATACCTAGTAAACCAGTTCATGCAAGCAACAAGACTCAAGTACTGAAAGTTTCAGTCGATAAGCGTGGCTGGGATTTCGTCATTCTCTCATGGAATACCATAAATGCAGCACGACCTCACGTGACTTACAAAGTCACCTCTCAAGGAGGAAACAACATTATTGACAAGATGACGTCAAACACCTCAGTGCTTCTCTCCGGCCTTGATCAGCTGACCAGATATAAAGTCAAAGTGCAGGCTCAGGAAAAGACTGGTGGCTTTTTACTCGCGTCGGCTGTGGTCGTTTTCAACACAATAGATAAGGATGAGTGCATGGAAATGTCCAACATTTGTTCCGATCACTCTGAGTGTATGAATACCAGAGGAAGCTATTTTTGTCGCTGTCTTCCGGGCTGGACTGGTGACGGAAAAAGCTGCAAAGAAGTAGACAAAGAAAACCAAACGTATTGTGACAACCACAACTACGCAAACATCACGTGGACGATTACGTCACAAGGGAAAACGGCGTTGTCACCGTGTCCTGGTGGAACAAGAGGTATCGCCAAAAGACGATGTTTGCAAGTTTCTAGTGGAGATGCGAAGTGGGGAGTTCCTGACCTCAGTGAATGTGTCTCAGACAGGATGTTAGATATCGCACAACTGTTGGACGATCCTGATGCTGACGTCACTGAGATTGCCATGCAACTGGTCAACGTCACCGCTGTCTCCACGCATGCGCAAGCTCCATTGCAAACTGGCGACCTAAAATTAGCTGTTGACGTCATAGGGAAGATTTCTGAGAGGAGTCTGAAGATAATTCAACAGCAATACCCTGATGCTACCAAGAGAGCTGAGAAAGTTCGAGAAATCACCCAGGCCGTGGTGAAATCTTCCAGCAACATCGTGGACAGCAAAGCTCTTGAATCGTGGAAGTTTATGCCAAAGGATTCTATGGCGGCCGAAGCCAGTAAACTATTAAAAGGAGTGGATACCACTGCTTTGCATTTGGCCAAAACAGCACTCACAAGAGATGCCACAGTATCTGAGGCTCCAAACGTCGTGTTGAGTGCAAAGGCAATAGAAGACCTCGATCCATCTGACCAGCGGATGCCACCCTTACCCAGAAACTCCAGGCCCATAGATGACGTGACCAGCAAAATGCACAATGTCACATCTAGTGTCTTGTTACCAGGCTCCGTGCTCATGCTGCAAAAGAATGCTAGTGACCCAAGCACGACTCATTATATAACATTTGTGTCCTTCCGTAACCTCAAAGCATTGATGCAACCGATTGCGGACGACAAATCTCTAGAGCCGTCTGAAGAAGGAAGTGACTTGGGAAGAATAGAATCAGAAATCACATCAGTTTCATTGCACCCAATGAAAATTAATTATTTTGAGGAACCTGTCGTATTAACTCTTAAAAACAGTCAGAATGGCGGCAAAGGCCAAGCAAGCTGTGTATTTTGGAATATATCCGGTCCTCGTGGTTTCTGGTCAGAAGAAGGTTGTTATTTGACAAAAAGCAATTCCAGCCATACCACGTGTGAATGTGACCATCTCACAAGCTTTGCTGTGCTCATGCGCATAGTAGACATGCCAGACAATGACGTCATGAAGAAACATCAGTTTGCCTTAAGTCTCATTTCCTACATTGGAATCTCTATTTCAATCGTGGCTTTATCAATATCATTTCTTACCTTCACGTTTCTAAGGTTTAGAAATACGCGTCACCGTTATTTTGTTCATGCCAACTTAGCGCTCTCCCTGGGTTTAGCGGAGACTTTGTTTCTCTTTGGCATCACAAAGACAGCAAACCAGATAATCTGTAAAACCATCGCGATCACACTACACTATCTATTCCTGGTGTCATTCTGTTGGATGGCGCTGGAAGGAATCGTCCTATATCTCTTACTCGTCAAAATCTTCCGCTCCAAGACTCGGCCAGCGAGAGACAGAGCTGTGTTTTTATTTTGTGGCTGGGGTATCCCAGCTATTGTAGTGGGTGGGTCTGCTGTGTTATTTCATGAAGGCTACGGAACAGAGGAATTTTGTTGGCTATCTTTTGAGAGACATTTCACCTGGGCGTTCGTGGGACCGGTGCTTCTTGTATGCTTGTTTAACATTATTTGCTTGGTAAAGACGTTTATGATTATGTCAACTCGAGGGAGCGTTAAGGATAGCGACACGAGCATTGTGAAAATAAGATACTGGGCTAAAGGTTGTGCGTTACTTTCTTGTCTTCTTGGCCTGACGTGGATTCTTGGAGTTTTTGTAGTAAATCAAGAAACCATATTCATGGCATACCTCTTTAATATATTCAACACACTTCAGGGATTAATGATATTTCTTTTCCACTGCGTCGGAGATGAAAAGGTGCGCGCAGAATATTTACGTATACTCCGCTGTCAAACACGCTCGCAGGCCTACGGCTTAGCCCGTCCGTGGTGGAGTAAGTCCGACTCGTTTAGCCGTTCTAGAACGTGGGAAGAGAGGAAACTCAGAAGAAGTACTCTACAATCAAACGTTGAATCTCCGAAGACCACTCATGGCTCAATTCAAAGAAGGACTAACATCAATACAGGCCCAGAAGATATCACTTTACGAGAAGGAATAAATCGACCAATGGAAATGAGCCAGATGTATGGAATAATTGAAGATGACTGTGTACAAAATAACGATGAAACCGAGATTCAGCAGACAACAGAGGGATTAGAGAGTCCGACTGACACAGGAAATCAGGTGGAAAGCTGTGAACCAGAATTAACACAGAATTCCGAAGAAAGCACTGAGGCGGAACCTGAACCAGTTGAAACCGGTTTGACGTGTTCTTGTGAAAGTGCATCACAACCCAATCTCCCGGATGTAATACAGAATGACTGCAAAGACTTCGATAAAGCTGAAAATAACAGTGAGGTCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HAR2	Adhesion G protein-coupled receptor L3 OS=Homo sapiens OX=9606 GN=ADGRL3 PE=1 SV=2
O97827	Adhesion G protein-coupled receptor L3 OS=Bos taurus OX=9913 GN=ADGRL3 PE=2 SV=1
Q80TS3	Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000054 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF16489 all species →	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR032471 all species →	Domain	GAIN domain, N-terminal	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR008077 all species →	Family	GPCR, family 2, brain-specific angiogenesis inhibitor	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016525 all species →	Biological Process	negative regulation of angiogenesis	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.1930.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.