Detailed information of evm.model.Ap14.1947 in Astrangia poculata

Genomic Location: Ap14:21257847...21267814
NR annotation: XP_020607486.1, ubiquitin-conjugating enzyme E2 U-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5VVX9Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens OX=9606 GN=UBE2U PE=1 SV=1
Q95LM1Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis OX=9541 GN=UBE2U PE=2 SV=1
P25865Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007763 (this species only)
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species
Ubiquitin familyE2|UEV|UEV · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050113
all species →		FamilyUbiquitin-conjugating enzymeInterproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24067
all species →		UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0016574
all species →		Biological Processobsolete histone ubiquitinationInterproscan
GO:0033503
all species →		Cellular ComponentHULC complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061631
all species →		Molecular Functionubiquitin conjugating enzyme activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.1947.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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