Genomic Location: Ap14:22046549...22052227
NR annotation: CAH3156774.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap14.2016 |
| Transcript |
| evm.model.Ap14.2016 |
| Protein |
| evm.model.Ap14.2016 |
| UniProt accession | Description |
|---|---|
| Q5ZK84 | Aldo-keto reductase family 1 member A1 OS=Gallus gallus OX=9031 GN=AKR1A1 PE=2 SV=1 |
| Q5R5D5 | Aldo-keto reductase family 1 member A1 OS=Pongo abelii OX=9601 GN=AKR1A1 PE=2 SV=1 |
| P14550 | Aldo-keto reductase family 1 member A1 OS=Homo sapiens OX=9606 GN=AKR1A1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000685 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00248 all species → | Aldo_ket_red | Aldo/keto reductase family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036812 all species → | Homologous_superfamily | NADP-dependent oxidoreductase domain superfamily | Interproscan |
| IPR020471 all species → | Family | Aldo-keto reductase | Interproscan |
| IPR018170 all species → | Conserved_site | Aldo/keto reductase, conserved site | Interproscan |
| IPR023210 all species → | Domain | NADP-dependent oxidoreductase domain | Interproscan |
| IPR044481 all species → | Family | Aldo-keto reductase family 1 member A1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11732 all species → | ALDO/KETO REDUCTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0004032 all species → | Molecular Function | aldose reductase (NADPH) activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0008106 all species → | Molecular Function | alcohol dehydrogenase (NADP+) activity | Interproscan |
| GO:0046185 all species → | Biological Process | aldehyde catabolic process | Interproscan |
evm.model.Ap14.2016.Transcript abundance of evm.model.Ap14.2016 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
