Detailed information of evm.model.Ap14.2019 in Astrangia poculata

Genomic Location: Ap14:22084040...22085116
NR annotation: XP_020607472.1, ankyrin repeat domain-containing protein 20B-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000722 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13606
all species →		Ank_3Ankyrin repeatRepeatInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050842
all species →		FamilyCul2-RING E3 Ligase Substrate-Recognition Fem-1Interproscan
IPR002110
all species →		RepeatAnkyrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24173
all species →		ANKYRIN REPEAT CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.2019.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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