Gene detail

Detailed information of evm.model.Ap14.222 in Astrangia poculata

Genomic Location: Ap14:2318090...2337296
NR annotation: XP_020615502.1, uncharacterized protein LOC110053592 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.222

atgaggacaaggttactgcttgcctttctgtatggttatctctgtttgcatctggctctgaacgatgtcagtggcgaggatgaagaagaaaacggaggtgaagaaggggatgaggaagatgaagatcctgtagacgagcaattcgacattgatgcagataatatggaagatctagcaaaggagatagcagaaaaagccataacgaaacaactggagattatggaagagcaacaacagagggcacaagaatttgtggacagcaagttggacatcaacatcgaaccagaaaaaggctggaaaacagaagacttgtttgttcctcctggttttcacgtcgatgctgagatgaccggggaagacgagaagccagagggggaggctggtgaccagccatttctgtaccctatgggggtgggtggaatgttaatgaattcctgcgttggaacaaactaccaaccaggggacccctgttatgaggcttattgggcgacaaccagatgtgagagcatgattgatggtgcagcgtttattggcgttggttttgatggtcgtggcgattacagtcctgaatcacgaaagatgagcattgtacaaagagattgttcagggagatccacatacgacgactttgatgttccagacacaatgaatgtgcatggagtgtacgataccagtgcaacaatgcagacattttacagtcgaaaagaataccagcagtcactacaaaaacaagcgggaatggcggggtctgcatttggattttatggtggcgtgaaaaaagcttggggaagttcgacactgagcggctcacagaaatacatggcactgtttgaaattgatattgacaggtatgaaatatatcttgacgaggtgaagcccggagatcttagcgtgaacttccttcgtgaatttatggatctacctttatcttatcttgctcctggtgcagctatgaaattccagaactttattcttcgttggggaactcactacataaaatcaggaaaattcggtggacgtcttcaggtctttaaaacaatggaaggtagtcaggtgtcaagcaaagcagagtttagccaagtaatggaagtcgaattcagaagtttgtttgcgagctttaacgccaagagcgaaagtaaacagagtagcagccagcaacgccagcataaaacgtcatcgacctcaatttcagttgaagggggagatcaggagatagcttcgatcatctcagatatggaatcgccaactatcaaaactgaattgaaacagtggctcgaatcaattcgtacatttccaaagccatttaagttcatggttgcaccaatcacaaacctgctcaagttcaatgtccattccctgtttcctgatgaggagtctgactggggctgtgaggcaaataaacgccgattgaagaaggacccccatacggacgaatattattatgagatcaagataaatggtaccttagttagaaagccttgtccatacctggaccgcgaggcactcatgtatgacatggagcgtagacggaataatctggatatagctattggtgtttatatggaagaggggccaatttcaccctctgatatcagcctccctgctggcgagcccggatgtcaaacggagaactacaatttccagaaacaatctgcgaggccaacttgggaggaaatgacacacgatagcatgccatttgttgttattttcacgacacgcgaagacctagtgggatcgtggaatggcccttctacaataccagccaagatggagaaagtcgtaaaatacttcaacggtaaatggtttgtcggtgatgatgctaacgacatggacatgacgtcatcctgcaagaccaaagaaggagaggaaggggaaaacaaaatctgcattatgggctttactctgaaatactattccgacagtggatttcttaggctagccgaggaagacttagaaattaacaaaatgaattataagtctttgagacatgcagatgttggtagactgtttgcgcacgtggaatggacacagggtcacgctttccgttttcaagaagtggttggttatcttccgtgtaacgtgaaatggtcgaacgcgttacgatttgatcctagtaacacacaaggaaagtgtcttcacttcacagccgtttccgagggcacgatatttgtagttttcgccgcagttccaaatgaccgagatacctggtattatgtcgagatttccccatttggtgttggaatatttaagtctcaaaaactggaggtttccacaactgatgtcagcgcagttggtttaggaagtgatgtcctatatcagtcctacttcgtctgtgtaacagaaacgtcagaacgcaccgtgattgaatacggcaagagttcgcgttcgacaggccacggggacgtgttcctcacgatggtagatgtagttaacccaaagtatgtccgttggtattcatttggtaatggcgaggaaacccttcaagtggtggatgcacacattctgtcgcgtcagtttaccaaagctacttgccatggagaaaacggattggacgaaaaaacaaatatgtgtacactagggtttgaatgccagtcttacaaagtgctcgatcaagtcgaccgtggaatgagttttagtggcttaagtgaagaaaaatgcgatgaagagatcagctcaatagcatggtatcgaatgatgggaagggctggtgaccagataccagaaaaatgcgttcccatcaaccgctgcggcactcgcgctcccgggtggctgaatggcaaacatccaactgttgaggatggtatcgtgactcgtgaagtgtgttataactggaacgacaactgctgtaactggaaaaacaacatcaatatcagaaactgcggtgatttctttgtgtatcagctacagaagccacccacttgctcattgcgttactgtggcaacgctgatgaatgtaaatcctaccaatccgtggaccaggctgaccgtagtatgagttttgccgacgaaaacgtagtgaaatgtgaccagaaagaacaagatggcatgagttttccaggctggtatcgcttcacgggagagactggtgaccagatgccggataagtgcgttcccacagggcgttgcggtactaaggctactggttggctcaaaggagcacatccaactgaacaggacggggtagtgactcgtgaagtctgttatcactgggataacaactgctgtaaatggaaaaacaacatcaaggtccgcaactgtggcgagttttttgtgtatgaactacaaaagccgccttcttgtgatttacgttactgtggcaatcgacaaggtcaggaatgcaagaactacaaagaactggatgaggccgatcgtggaatgggttttgccaaccaaagcgtagtcaaatgtgacggaaaagatgcaagtaacctcaatggctggtatcggatcacgggaaaggctggtgaccagttggcagataagtgcgttccaatcaagcgatgcggcactttagctactggctggctcaatggcaaacacccaactgttgatgagcttgtagtgactcgtgaagtgtgttaccactgggaagataactgctgtaaatttaaaaacaacattcaggtccgcaactgtggcgacttctatgtgtacgaacttggaccgacacctggctgtcaattccgttactgtggcaacgaggacatagagctgggtgatgaatgtcaaagtgggcattataaagtactcgatgaagcggaccgcgcaatgagaaacaaagatagaagcaacgttaaatgtgacaggaacgacatcagttatggctggtaccgaataacgggagacgctggtgaccagattccggaagagtgcgttcccgagtaccattgcggtactcatgcgcctgggtggctcaatggtaaacatccgactgtccaggaagggatagtgactcgccaagtttgctatcgctgggatggtaactgctgtaaatacaaaaacgacataaggatccgcaactgtggcggttattttgtgtacgaactacaaaagctttctaactgtgatttgcgttactgtggtaacaaaaatgaatgccaaaaggatgaagccctcggcatgcagagtggtaaaatcatcaacgagcaaataacaggttcttcacaatactctatcacacatgccgcgtttcgcgctaggttgaacagacagacagaggaaggcatgaatggaggatggtcggctgccacaaatgatgctcatcaatggattcaggtcgattttggcgatattaccaccgtgaaacgtgtggcaactcagggaagagtagagtacggtcaatgggtgaaaaaatacaaactgcagcaccgcgagaacagtggtcaggcattccagacatattttaagacatttactggcaacagcaatcaaaacaccgtagttactcataagctggacccgtggattaaagcgcgctacgtacggcttctgcctgtagagtggcacagtcacatttcaatgaggatggagttttatgggtgtaaagattgcgctgaggccataagcggttctacctgcaaagttttgtcgcagtcttgctcctttccgagtgtagagcgtaacaactgtggatatggcgggatcagtcagtcaacatgtgaagccagagggtgttgctgggatgacagcattagagacgttccgtggtgcttttctggaaaattgagagtttcctaa

Transcript

evm.model.Ap14.222

ATGAGGACAAGGTTACTGCTTGCCTTTCTGTATGGTTATCTCTGTTTGCATCTGGCTCTGAACGATGTCAGTGGCGAGGATGAAGAAGAAAACGGAGGTGAAGAAGGGGATGAGGAAGATGAAGATCCTGTAGACGAGCAATTCGACATTGATGCAGATAATATGGAAGATCTAGCAAAGGAGATAGCAGAAAAAGCCATAACGAAACAACTGGAGATTATGGAAGAGCAACAACAGAGGGCACAAGAATTTGTGGACAGCAAGTTGGACATCAACATCGAACCAGAAAAAGGCTGGAAAACAGAAGACTTGTTTGTTCCTCCTGGTTTTCACGTCGATGCTGAGATGACCGGGGAAGACGAGAAGCCAGAGGGGGAGGCTGGTGACCAGCCATTTCTGTACCCTATGGGGGTGGGTGGAATGTTAATGAATTCCTGCGTTGGAACAAACTACCAACCAGGGGACCCCTGTTATGAGGCTTATTGGGCGACAACCAGATGTGAGAGCATGATTGATGGTGCAGCGTTTATTGGCGTTGGTTTTGATGGTCGTGGCGATTACAGTCCTGAATCACGAAAGATGAGCATTGTACAAAGAGATTGTTCAGGGAGATCCACATACGACGACTTTGATGTTCCAGACACAATGAATGTGCATGGAGTGTACGATACCAGTGCAACAATGCAGACATTTTACAGTCGAAAAGAATACCAGCAGTCACTACAAAAACAAGCGGGAATGGCGGGGTCTGCATTTGGATTTTATGGTGGCGTGAAAAAAGCTTGGGGAAGTTCGACACTGAGCGGCTCACAGAAATACATGGCACTGTTTGAAATTGATATTGACAGGTATGAAATATATCTTGACGAGGTGAAGCCCGGAGATCTTAGCGTGAACTTCCTTCGTGAATTTATGGATCTACCTTTATCTTATCTTGCTCCTGGTGCAGCTATGAAATTCCAGAACTTTATTCTTCGTTGGGGAACTCACTACATAAAATCAGGAAAATTCGGTGGACGTCTTCAGGTCTTTAAAACAATGGAAGGTAGTCAGGTGTCAAGCAAAGCAGAGTTTAGCCAAGTAATGGAAGTCGAATTCAGAAGTTTGTTTGCGAGCTTTAACGCCAAGAGCGAAAGTAAACAGAGTAGCAGCCAGCAACGCCAGCATAAAACGTCATCGACCTCAATTTCAGTTGAAGGGGGAGATCAGGAGATAGCTTCGATCATCTCAGATATGGAATCGCCAACTATCAAAACTGAATTGAAACAGTGGCTCGAATCAATTCGTACATTTCCAAAGCCATTTAAGTTCATGGTTGCACCAATCACAAACCTGCTCAAGTTCAATGTCCATTCCCTGTTTCCTGATGAGGAGTCTGACTGGGGCTGTGAGGCAAATAAACGCCGATTGAAGAAGGACCCCCATACGGACGAATATTATTATGAGATCAAGATAAATGGTACCTTAGTTAGAAAGCCTTGTCCATACCTGGACCGCGAGGCACTCATGTATGACATGGAGCGTAGACGGAATAATCTGGATATAGCTATTGGTGTTTATATGGAAGAGGGGCCAATTTCACCCTCTGATATCAGCCTCCCTGCTGGCGAGCCCGGATGTCAAACGGAGAACTACAATTTCCAGAAACAATCTGCGAGGCCAACTTGGGAGGAAATGACACACGATAGCATGCCATTTGTTGTTATTTTCACGACACGCGAAGACCTAGTGGGATCGTGGAATGGCCCTTCTACAATACCAGCCAAGATGGAGAAAGTCGTAAAATACTTCAACGGTAAATGGTTTGTCGGTGATGATGCTAACGACATGGACATGACGTCATCCTGCAAGACCAAAGAAGGAGAGGAAGGGGAAAACAAAATCTGCATTATGGGCTTTACTCTGAAATACTATTCCGACAGTGGATTTCTTAGGCTAGCCGAGGAAGACTTAGAAATTAACAAAATGAATTATAAGTCTTTGAGACATGCAGATGTTGGTAGACTGTTTGCGCACGTGGAATGGACACAGGGTCACGCTTTCCGTTTTCAAGAAGTGGTTGGTTATCTTCCGTGTAACGTGAAATGGTCGAACGCGTTACGATTTGATCCTAGTAACACACAAGGAAAGTGTCTTCACTTCACAGCCGTTTCCGAGGGCACGATATTTGTAGTTTTCGCCGCAGTTCCAAATGACCGAGATACCTGGTATTATGTCGAGATTTCCCCATTTGGTGTTGGAATATTTAAGTCTCAAAAACTGGAGGTTTCCACAACTGATGTCAGCGCAGTTGGTTTAGGAAGTGATGTCCTATATCAGTCCTACTTCGTCTGTGTAACAGAAACGTCAGAACGCACCGTGATTGAATACGGCAAGAGTTCGCGTTCGACAGGCCACGGGGACGTGTTCCTCACGATGGTAGATGTAGTTAACCCAAAGTATGTCCGTTGGTATTCATTTGGTAATGGCGAGGAAACCCTTCAAGTGGTGGATGCACACATTCTGTCGCGTCAGTTTACCAAAGCTACTTGCCATGGAGAAAACGGATTGGACGAAAAAACAAATATGTGTACACTAGGGTTTGAATGCCAGTCTTACAAAGTGCTCGATCAAGTCGACCGTGGAATGAGTTTTAGTGGCTTAAGTGAAGAAAAATGCGATGAAGAGATCAGCTCAATAGCATGGTATCGAATGATGGGAAGGGCTGGTGACCAGATACCAGAAAAATGCGTTCCCATCAACCGCTGCGGCACTCGCGCTCCCGGGTGGCTGAATGGCAAACATCCAACTGTTGAGGATGGTATCGTGACTCGTGAAGTGTGTTATAACTGGAACGACAACTGCTGTAACTGGAAAAACAACATCAATATCAGAAACTGCGGTGATTTCTTTGTGTATCAGCTACAGAAGCCACCCACTTGCTCATTGCGTTACTGTGGCAACGCTGATGAATGTAAATCCTACCAATCCGTGGACCAGGCTGACCGTAGTATGAGTTTTGCCGACGAAAACGTAGTGAAATGTGACCAGAAAGAACAAGATGGCATGAGTTTTCCAGGCTGGTATCGCTTCACGGGAGAGACTGGTGACCAGATGCCGGATAAGTGCGTTCCCACAGGGCGTTGCGGTACTAAGGCTACTGGTTGGCTCAAAGGAGCACATCCAACTGAACAGGACGGGGTAGTGACTCGTGAAGTCTGTTATCACTGGGATAACAACTGCTGTAAATGGAAAAACAACATCAAGGTCCGCAACTGTGGCGAGTTTTTTGTGTATGAACTACAAAAGCCGCCTTCTTGTGATTTACGTTACTGTGGCAATCGACAAGGTCAGGAATGCAAGAACTACAAAGAACTGGATGAGGCCGATCGTGGAATGGGTTTTGCCAACCAAAGCGTAGTCAAATGTGACGGAAAAGATGCAAGTAACCTCAATGGCTGGTATCGGATCACGGGAAAGGCTGGTGACCAGTTGGCAGATAAGTGCGTTCCAATCAAGCGATGCGGCACTTTAGCTACTGGCTGGCTCAATGGCAAACACCCAACTGTTGATGAGCTTGTAGTGACTCGTGAAGTGTGTTACCACTGGGAAGATAACTGCTGTAAATTTAAAAACAACATTCAGGTCCGCAACTGTGGCGACTTCTATGTGTACGAACTTGGACCGACACCTGGCTGTCAATTCCGTTACTGTGGCAACGAGGACATAGAGCTGGGTGATGAATGTCAAAGTGGGCATTATAAAGTACTCGATGAAGCGGACCGCGCAATGAGAAACAAAGATAGAAGCAACGTTAAATGTGACAGGAACGACATCAGTTATGGCTGGTACCGAATAACGGGAGACGCTGGTGACCAGATTCCGGAAGAGTGCGTTCCCGAGTACCATTGCGGTACTCATGCGCCTGGGTGGCTCAATGGTAAACATCCGACTGTCCAGGAAGGGATAGTGACTCGCCAAGTTTGCTATCGCTGGGATGGTAACTGCTGTAAATACAAAAACGACATAAGGATCCGCAACTGTGGCGGTTATTTTGTGTACGAACTACAAAAGCTTTCTAACTGTGATTTGCGTTACTGTGGTAACAAAAATGAATGCCAAAAGGATGAAGCCCTCGGCATGCAGAGTGGTAAAATCATCAACGAGCAAATAACAGGTTCTTCACAATACTCTATCACACATGCCGCGTTTCGCGCTAGGTTGAACAGACAGACAGAGGAAGGCATGAATGGAGGATGGTCGGCTGCCACAAATGATGCTCATCAATGGATTCAGGTCGATTTTGGCGATATTACCACCGTGAAACGTGTGGCAACTCAGGGAAGAGTAGAGTACGGTCAATGGGTGAAAAAATACAAACTGCAGCACCGCGAGAACAGTGGTCAGGCATTCCAGACATATTTTAAGACATTTACTGGCAACAGCAATCAAAACACCGTAGTTACTCATAAGCTGGACCCGTGGATTAAAGCGCGCTACGTACGGCTTCTGCCTGTAGAGTGGCACAGTCACATTTCAATGAGGATGGAGTTTTATGGGTGTAAAGATTGCGCTGAGGCCATAAGCGGTTCTACCTGCAAAGTTTTGTCGCAGTCTTGCTCCTTTCCGAGTGTAGAGCGTAACAACTGTGGATATGGCGGGATCAGTCAGTCAACATGTGAAGCCAGAGGGTGTTGCTGGGATGACAGCATTAGAGACGTTCCGTGGTGCTTTTCTGGAAAATTGAGAGTTTCCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P25291	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
P19218	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Rattus norvegicus OX=10116 GN=Gp2 PE=1 SV=1
Q29RU2	Oncoprotein-induced transcript 3 protein OS=Bos taurus OX=9913 GN=OIT3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000542 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00088 all species →	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF01823 all species →	MACPF	MAC/Perforin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017994 all species →	Family	P-type trefoil, chordata	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR020864 all species →	Domain	Membrane attack complex component/perforin (MACPF) domain	Interproscan
IPR000519 all species →	Domain	P-type trefoil domain	Interproscan
IPR044913 all species →	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR017957 all species →	Conserved_site	P-type trefoil, conserved site	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46549 all species →	MACPF DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for evm.model.Ap14.222. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.222.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.