Detailed information of evm.model.Ap14.348 in Astrangia poculata

Genomic Location: Ap14:3591253...3591564
NR annotation: XP_001618258.1, histone H4 [Nematostella vectensis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35059Histone H4 OS=Acropora formosa OX=126732 PE=3 SV=2
Q6LAF1Histone H4 OS=Dendronephthya klunzingeri OX=84964 GN=H4DEKL PE=3 SV=3
P62803Histone H4 OS=Bos taurus OX=9913 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000551 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15511
all species →		CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001951
all species →		FamilyHistone H4Interproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR019809
all species →		Conserved_siteHistone H4, conserved siteInterproscan
IPR004823
all species →		DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425
all species →		DomainCENP-T/Histone H4, histone foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10484
all species →		HISTONE H4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006334
all species →		Biological Processnucleosome assemblyInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11254H4; histone H4-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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