Detailed information of evm.model.Ap14.365 in Astrangia poculata

Genomic Location: Ap14:3742344...3745425
NR annotation: XP_020625708.1, leucine-rich repeat-containing protein 7-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80TE7Leucine-rich repeat-containing protein 7 OS=Mus musculus OX=10090 GN=Lrrc7 PE=1 SV=2
P70587Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Lrrc7 PE=1 SV=2
Q96NW7Leucine-rich repeat-containing protein 7 OS=Homo sapiens OX=9606 GN=LRRC7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003258 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050614
all species →		FamilySynaptic Scaffolding LAP/MAGUK FamiliesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23119
all species →		DISCS LARGEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005912
all species →		Cellular Componentadherens junctionInterproscan
GO:0009790
all species →		Biological Processembryo developmentInterproscan
GO:0014069
all species →		Cellular Componentpostsynaptic densityInterproscan
GO:0016323
all species →		Cellular Componentbasolateral plasma membraneInterproscan
GO:0030054
all species →		Cellular Componentcell junctionInterproscan
GO:0043113
all species →		Biological Processreceptor clusteringInterproscan
GO:0045197
all species →		Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0045211
all species →		Cellular Componentpostsynaptic membraneInterproscan
GO:0097120
all species →		Biological Processreceptor localization to synapseInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan
GO:0098887
all species →		Biological Processneurotransmitter receptor transport, endosome to postsynaptic membraneInterproscan
GO:0098968
all species →		Biological Processneurotransmitter receptor transport postsynaptic membrane to endosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.365.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP