Detailed information of evm.model.Ap14.395 in Astrangia poculata

Genomic Location: Ap14:4225820...4235981
NR annotation: KAJ7386551.1, hypothetical protein OS493_008688 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0825372 kDa type IV collagenase OS=Homo sapiens OX=9606 GN=MMP2 PE=1 SV=2
D3ZTE0Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1
P5075772 kDa type IV collagenase OS=Oryctolagus cuniculus OX=9986 GN=MMP2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000377 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR051666
all species →		FamilySeminal Plasma Capacitation RegulatorInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22918
all species →		SEMINAL PLASMA PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008201
all species →		Molecular Functionheparin bindingInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap14.395.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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