Gene detail

Detailed information of evm.model.Ap14.58 in Astrangia poculata

Genomic Location: Ap14:503883...523178
NR annotation: KAJ7370789.1, DOMON domain-containing protein frrs1L [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.58

atgacgttcttgttacaggtcactgttattctgcttgtgaggttgtcagagctgtgggcatttcctgatggtcctcccttgagtacatgtgaatacatgactccccaccacaaaaataccaaaccccagtcaacagtggctccttacaacatcgctgtgtccaaaagttcgtacactgctggagaaaacctcacagtgacaatatcaggaacaaagacttttaagggatttattttacaagctcaggggacaaacagtccagtcgcgtggccagtgggagtgttcaaccaaatccaagatggtgcgcagtttgtttactgctctggtggagaaccaaagaacacagttgctcataacaattccaagagaactaattggaactcccgccagttcacatggatggctcccgcaaagagccctgggaacataactttcgtcgctaccatcgttgagaactacagcacgttttggaccaaagttaagtcatctgtagttactgggcccccagcagagaacgtcaccagaggggctcaaaccgagagctttcagattgacaagactggatgtggaaagaccaaaggctgctactcgctgccaacaaactgcgccggaagttccgactgctattatctctttacttaccaagtttctggcggaagtgtcaccatagaaatgagtgctaaacaacgctgggttgctgttgcctttaatgaccagaaaaaaatggacaagatggatgccataatgtgcgtcaccatggcaaccaacctggcggaattacgtcattactattcacatgaccacaaccttgtccgacagaacctggctgggaacagtgacatcactctgacgaagatcgtttatgaggatggcggaattaagtgcaagctgactcgcaagcttacctcaagtgaggcccactttagagatctgacaaagaaatggtatcttattttctcccatggtaaaacaagtccttcaggcagtgcacagtatcactatgacaacaaaactttcactggtgacatggtggacctctctgtcgccgcagtgttagttgatgaaaaaagtcaaaccaaagagacaatcagcaaagacggatgcggcaaaacaaaaagctgctattctgagcccgacagctgtaagtccagcagtgattgcgactatctcgtgaccataaaacccgtgggggacacgggtgagtccggcgaggtggaatttgagcttagtaccaaaaaacaatgggcagccattggcttcaacaaggaaaaagatgaaatgcctgataccgatgcattaatctgcgctgacgtcagtgggcaagcttctgtggaccattatgtgactgacaaaggatacgacccaccaaccaagaccaccccaagacctgcatcccttgttttagattctggagaatcaaaaggtggagttctaagctgtcgttttcgaagaactaagaagaaaggtgacaaaatggcggaccttacagagaagtggtatcttgtttacgcaaacggacccatgaggggagacacaattggtaagcactcttccactccgaaaacaagtccagagatggtgaaggtagatgaagtaactgttcttggtgctgaagaggagggttccggaatgattaaagctcacggttgtttaatggtcattgcatgggttggtttcgcgtcgattggaattttcatggcccgttacatgaaggtggcgtttggtgagaaggttctgctgggaactaaagcatggtttacgtttcatcgatcactgatggttctgacagtgctggtgactatcatttctattatcatcatatttgttcatgctggacgctggaccaaggaggctggtgcccaccctgtcactggtatcattgtactggtactggctgttattcagccaatcatggcattgttcagaccccaccccggagaggacaaccgttacatctttaactgggcccatcgtggagttggtctgtctgcgcttatcttggctgtggtgactgtgttccttggtattcgcctggatgacgcaggcctggatgactccgctctttacgccatgattgtctactgtgtgggcgtggcttttgtcatcgtgtttgacattttcctttctcttaagaagaaggacaacagatcggcaacttttagccctgcagggggagaaaaagatgctggtgagttaggactctgtcagtcaactatttcttaa

Transcript

evm.model.Ap14.58

TTTATGTTTCTCTCCTTAGAAGCTACCTGAGGCGGAAAACTACCATGACGTTCTTGTTACAGGTCACTGTTATTCTGCTTGTGAGGTTGTCAGAGCTGTGGGCATTTCCTGATGGTCCTCCCTTGAGTACATGTGAATACATGACTCCCCACCACAAAAATACCAAACCCCAGTCAACAGTGGCTCCTTACAACATCGCTGTGTCCAAAAGTTCGTACACTGCTGGAGAAAACCTCACAGTGACAATATCAGGAACAAAGACTTTTAAGGGATTTATTTTACAAGCTCAGGGGACAAACAGTCCAGTCGCGTGGCCAGTGGGAGTGTTCAACCAAATCCAAGATGGTGCGCAGTTTGTTTACTGCTCTGGTGGAGAACCAAAGAACACAGTTGCTCATAACAATTCCAAGAGAACTAATTGGAACTCCCGCCAGTTCACATGGATGGCTCCCGCAAAGAGCCCTGGGAACATAACTTTCGTCGCTACCATCGTTGAGAACTACAGCACGTTTTGGACCAAAGTTAAGTCATCTGTAGTTACTGGGCCCCCAGCAGAGAACGTCACCAGAGGGGCTCAAACCGAGAGCTTTCAGATTGACAAGACTGGATGTGGAAAGACCAAAGGCTGCTACTCGCTGCCAACAAACTGCGCCGGAAGTTCCGACTGCTATTATCTCTTTACTTACCAAGTTTCTGGCGGAAGTGTCACCATAGAAATGAGTGCTAAACAACGCTGGGTTGCTGTTGCCTTTAATGACCAGAAAAAAATGGACAAGATGGATGCCATAATGTGCGTCACCATGGCAACCAACCTGGCGGAATTACGTCATTACTATTCACATGACCACAACCTTGTCCGACAGAACCTGGCTGGGAACAGTGACATCACTCTGACGAAGATCGTTTATGAGGATGGCGGAATTAAGTGCAAGCTGACTCGCAAGCTTACCTCAAGTGAGGCCCACTTTAGAGATCTGACAAAGAAATGGTATCTTATTTTCTCCCATGGTAAAACAAGTCCTTCAGGCAGTGCACAGTATCACTATGACAACAAAACTTTCACTGGTGACATGGTGGACCTCTCTGTCGCCGCAGTGTTAGTTGATGAAAAAAGTCAAACCAAAGAGACAATCAGCAAAGACGGATGCGGCAAAACAAAAAGCTGCTATTCTGAGCCCGACAGCTGTAAGTCCAGCAGTGATTGCGACTATCTCGTGACCATAAAACCCGTGGGGGACACGGGTGAGTCCGGCGAGGTGGAATTTGAGCTTAGTACCAAAAAACAATGGGCAGCCATTGGCTTCAACAAGGAAAAAGATGAAATGCCTGATACCGATGCATTAATCTGCGCTGACGTCAGTGGGCAAGCTTCTGTGGACCATTATGTGACTGACAAAGGATACGACCCACCAACCAAGACCACCCCAAGACCTGCATCCCTTGTTTTAGATTCTGGAGAATCAAAAGGTGGAGTTCTAAGCTGTCGTTTTCGAAGAACTAAGAAGAAAGGTGACAAAATGGCGGACCTTACAGAGAAGTGGTATCTTGTTTACGCAAACGGACCCATGAGGGGAGACACAATTGGTAAGCACTCTTCCACTCCGAAAACAAGTCCAGAGATGGTGAAGGTAGATGAAGTAACTGTTCTTGGTGCTGAAGAGGAGGGTTCCGGAATGATTAAAGCTCACGGTTGTTTAATGGTCATTGCATGGGTTGGTTTCGCGTCGATTGGAATTTTCATGGCCCGTTACATGAAGGTGGCGTTTGGTGAGAAGGTTCTGCTGGGAACTAAAGCATGGTTTACGTTTCATCGATCACTGATGGTTCTGACAGTGCTGGTGACTATCATTTCTATTATCATCATATTTGTTCATGCTGGACGCTGGACCAAGGAGGCTGGTGCCCACCCTGTCACTGGTATCATTGTACTGGTACTGGCTGTTATTCAGCCAATCATGGCATTGTTCAGACCCCACCCCGGAGAGGACAACCGTTACATCTTTAACTGGGCCCATCGTGGAGTTGGTCTGTCTGCGCTTATCTTGGCTGTGGTGACTGTGTTCCTTGGTATTCGCCTGGATGACGCAGGCCTGGATGACTCCGCTCTTTACGCCATGATTGTCTACTGTGTGGGCGTGGCTTTTGTCATCGTGTTTGACATTTTCCTTTCTCTTAAGAAGAAGGACAACAGATCGGCAACTTTTAGCCCTGCAGGGGGAGAAAAAGATGCTGGTGAGTTAGGACTCTGTCAGTCAACTATTTCTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K385	Ferric-chelate reductase 1 OS=Mus musculus OX=10090 GN=FRRS1 PE=1 SV=1
Q6ZNA5	Ferric-chelate reductase 1 OS=Homo sapiens OX=9606 GN=FRRS1 PE=1 SV=2
Q6INU7	Putative ferric-chelate reductase 1 OS=Xenopus laevis OX=8355 GN=frrs1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000664 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03188 all species →	Cytochrom_B561	Eukaryotic cytochrome b561	Family	Interproscan
PF03351 all species →	DOMON	DOMON domain	Domain	Interproscan
PF02014 all species →	Reeler	Reeler domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005018 all species →	Domain	DOMON domain	Interproscan
IPR006593 all species →	Domain	Cytochrome b561/ferric reductase transmembrane	Interproscan
IPR002861 all species →	Domain	Reeler domain	Interproscan
IPR042307 all species →	Homologous_superfamily	Reeler domain superfamily	Interproscan
IPR051237 all species →	Family	Ferric-chelate Reductase and Defense	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45828 all species →	CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016021 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.58.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.