Gene detail

Detailed information of evm.model.Ap14.711 in Astrangia poculata

Genomic Location: Ap14:7604506...7625360
NR annotation: XP_020624877.1, uncharacterized protein LOC110062344 isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.711

atgtgctcagttccttcgcttaacattattgcccgtttgggcgccatggcagttttagtatacatcacgcaatcggcatgttttgtagcttgttccaaagctcttggattggagagtaaatatattaaagattatcaactgtcggcttcttcacaattttcccaccaagcgagaccagcgctggcgagattcaacaataacgaaggccttggcggatggtgccctgataacaatgatccaaatccgtatcttcaagtagacctcctgacgcctcacaccatcaaaaaactggcaattcagggagccgacggcaactgggttaaacaattcaccttaaccttcagttatgacagcataagttggtttaattacacagtcgacggtaaaattaagggcccaaagaaccaatatcgggcagcgtcgcataaccttacacagccactgacagctcgtgctgttcgctttcatcccgtgttgtatccgtcgatgaatccgaagttagcaccttgcctaagagtggagatctatggctgccaaccaagtgaagattgtaacacgccagttggtgttgagactcgcaaaatcacagaccaacagatgtcagcttcatcccactggaaccaacattacgcctccaatgctagactcaacaaccaggccagtatgtccgtctgggatacatttgagatggcacagatgcttaacaagtcaatatttataatgtgtagactgtcctttgtcaatgttgatcttggacgggtgcggtctgtttccggtgtagaaactcaaggctatatgtatgacatgtttgtatccagttataaagtgaactacagtaccgacggattgacatggcagtcatacaaggagagaggagacagcagcagtaagatattccaaggtaactgggacaacgacacggtgataaagaaggtgttttcacgcagaatatttgcgcgatacattcgcttcaatcctttggcgtggaacaagggcggctttatctgcatgcgtgtcgagatctacgaatgtcttcctaccaaaggaagcgtaccggaagtgagtcctccaagtgaaacagtggaactcaaccgcaccagctccgtcaacttgacgtgcctagtttccggtcagcctggagcacacatggaatggtataagaacggactgcggatccctgacccaccacagtccattatccatcgcacgcaattcggtaacggtagcgtaaggagtatgttgactcttgaacgtgtcaagtatcgagaccgaggctccatcgtgtcttgtacggcctggtatccgtcgctttctatcaattcgactcggaatattcatcttcttgtacatgctccccgtcctgtcatggtcatcactaaagtccagtccaggaccgtgcagcttcgagtcacagacccgactccttctgacacagcgaagtacattgtgcgctacaaaacgcactcaccccactcggactgggtatcagtgttacgaaataagaccggcagtggtcgtgatacagtgatcatgttggacggcttatatccttacacgaagtacctgatggaggtagcatcttattacaaagatggcgacgagggaccgtatagtgtaccacatccgtttgagacagaacaagcagccccaagcggtcctcctcgtgatgtcgtgatcataccacgtggtaaaaacaccatcagagtgtcctggtccatccccagtgctaaagacagcaacggtaaaatcaccaaatacgaggtcgtgctctacaagccgagtggtgataaggaaacgttcatgaatgaagagaagacactgtcaaaggatattagtgacctggaaactaatcaacagtattacattggcgtgcgggcttacaccaaggtggggcctgggccctacagcagcaatatcacttattcgacagaagaaacaaaccaaggatcgcaaataacgcgtgcattagagaaacttaacaaggtcccagtaacagataacaacgctcttaaagttatgaaagaagtcaagaatattacgtcgaagtcttcggagttgttggagaaggacatctcccttacagcaaacatccttaaaaaaatcgtcaagacaaacgcaacgtcagctgatgtgggtgatcacgtgctagataccattagtcacgtgatggatgctaagactgacgtgctacaaaaaactcaaaaaaagtacaacacatcagctaaatttgtcaagttacttgacgagtatctcgagaagggcggaaagttcagcaaaagtacctcgaacattgctgttcatacacagttagttaaacacgggattcacttgtcagttcaaacgaccaaggacaagatcgcttttaacacaaccgaaaattcgacaagcggcgaaaacttggaaaacgaagctagtgtgaccgtgcctgcctcggttgtgaacacaactgacaataccacgttgattgttgtttactatcgaacaagcaagctttttgcgccagattatcgcaaaacggaggtatgtgaggatagctttactacagaaaagatgtccaaagtggaaccgtcgtcgcgttcttcgcgttatacaatggagaactctactggtgatgtcgtcaccgagagcagtcccgtgctctctgcaagcttaaggaaaaaacacgtggcgaatctgaccacgcccgttattatcaagttcaaaatgcctcatgaccagattgtcgaaaacagcacaaggtgtgtctggtgggatttcgaaaaaagtggatggtccactgaggggtgttctcttcgcggcatagttaatgacacaatcatttgcgaatgtaatcacatgaccaactttgcagccttagtggatgtggatgatcactcgagggcgtgtggcaaacactctaaggtgctgtcactcatcagctacattggctgcgcattgtctattttgggattgtcgctgaccattttcacttttggatttttcaagaagcttcgaaaggatcagattgcagctaagattctactacacctgtgtgcctcgcttctgtgtgtgctgatcgtgtttgtcgcaggggtggagaggggcggggtgtctgaggacgtgtgccggatcgtagcagcactcgttcattatttcttacttgtcgcgtttttatggatgttgatcgaggcttacttcatgtatcaagcatttgtcaaagtgttcagagactatggggattacgtcatgtggaaatgtgccgcaatggggtgggggattccatttatcgttgtaatcatcacgcttgctgtggataaaagcagctatggcggaaaacactattgccgtattggagacatagcattctttgcagctttcatggctcccgtgttgcttgtcattctcatcaacacagctacgttctcgttaatcatgtacaaactagcgacacgtccaccaaacgccgctgacccggaccgtggcactgaagggcttcttaaaatcaaaagagcgtttggaattcttattctagtcggcatcacatggatgtttgggttcttcgccataagtgaagctcgtctggtgttccagtatctcttcgccatttttaacagtcttcaaggctttgcaatcttcgtgttttattgtgtgattcaaaagaaagtccgcgagtgttggtgggctcttttgacctgtaatctgcgcagtctcaataagtcgaagtcgctgtacacggactcgtatgaccgcaggcggctgtcttcagccagcagggttcagcttgatgctatgagggcaaggagtaacaccaacctgtctcaggtgatgcaaatgccgttacgtaaagtaagcagtgtcccggatgtgattgtcgataaagttggcaggaataattgtcattaccatagcaacatggtttacgaagacgaccgagcccaggtgcctactgtgtcaattgaaccaagcgattatcagcttagcggaagccagggaatagaagtcaacgaatctatggacgaacttgccacgagattgtcatatcgttctgggtccagaacaccaagtctcagatcccacgcgctcactgtcacgcaatctcgagatcctagcgttcgtggctcgtatgtcacggtgaattctgcgcggtcaacaccgaaggtaccccccagggtaccacgcatcaacggtctgcgctcggctggagcgcttaattggtcacgcgagtgtatgcccgcgaaagagactctgaaaagaactgtgtcacacactcctgaggtgcagagaccggcaaataacggctcgtctctcagaagaacttgttcattaggggatcaaatgcgatttagcgcagattttagtgtgtgcagtgatcagacttcatgcgaatctctgagctcagaagctcaaactcccacgataaagaagcatcttggccttccatttgaaaaccttggtgagcagattgtaagcccactaagaggttcagttcgaggaattgttggatatgttgaaacgactgtggaaaattttgacttattaattgacttggagaggcaaagatcgttgtcttctcccgtgacaacacttcatcaagtgtaa

Transcript

evm.model.Ap14.711

ATGTGCTCAGTTCCTTCGCTTAACATTATTGCCCGTTTGGGCGCCATGGCAGTTTTAGTATACATCACGCAATCGGCATGTTTTGTAGCTTGTTCCAAAGCTCTTGGATTGGAGAGTAAATATATTAAAGATTATCAACTGTCGGCTTCTTCACAATTTTCCCACCAAGCGAGACCAGCGCTGGCGAGATTCAACAATAACGAAGGCCTTGGCGGATGGTGCCCTGATAACAATGATCCAAATCCGTATCTTCAAGTAGACCTCCTGACGCCTCACACCATCAAAAAACTGGCAATTCAGGGAGCCGACGGCAACTGGGTTAAACAATTCACCTTAACCTTCAGTTATGACAGCATAAGTTGGTTTAATTACACAGTCGACGGTAAAATTAAGGGCCCAAAGAACCAATATCGGGCAGCGTCGCATAACCTTACACAGCCACTGACAGCTCGTGCTGTTCGCTTTCATCCCGTGTTGTATCCGTCGATGAATCCGAAGTTAGCACCTTGCCTAAGAGTGGAGATCTATGGCTGCCAACCAAGTGAAGATTGTAACACGCCAGTTGGTGTTGAGACTCGCAAAATCACAGACCAACAGATGTCAGCTTCATCCCACTGGAACCAACATTACGCCTCCAATGCTAGACTCAACAACCAGGCCAGTATGTCCGTCTGGGATACATTTGAGATGGCACAGATGCTTAACAAGTCAATATTTATAATGTGTAGACTGTCCTTTGTCAATGTTGATCTTGGACGGGTGCGGTCTGTTTCCGGTGTAGAAACTCAAGGCTATATGTATGACATGTTTGTATCCAGTTATAAAGTGAACTACAGTACCGACGGATTGACATGGCAGTCATACAAGGAGAGAGGAGACAGCAGCAGTAAGATATTCCAAGGTAACTGGGACAACGACACGGTGATAAAGAAGGTGTTTTCACGCAGAATATTTGCGCGATACATTCGCTTCAATCCTTTGGCGTGGAACAAGGGCGGCTTTATCTGCATGCGTGTCGAGATCTACGAATGTCTTCCTACCAAAGGAAGCGTACCGGAAGTGAGTCCTCCAAGTGAAACAGTGGAACTCAACCGCACCAGCTCCGTCAACTTGACGTGCCTAGTTTCCGGTCAGCCTGGAGCACACATGGAATGGTATAAGAACGGACTGCGGATCCCTGACCCACCACAGTCCATTATCCATCGCACGCAATTCGGTAACGGTAGCGTAAGGAGTATGTTGACTCTTGAACGTGTCAAGTATCGAGACCGAGGCTCCATCGTGTCTTGTACGGCCTGGTATCCGTCGCTTTCTATCAATTCGACTCGGAATATTCATCTTCTTGTACATGCTCCCCGTCCTGTCATGGTCATCACTAAAGTCCAGTCCAGGACCGTGCAGCTTCGAGTCACAGACCCGACTCCTTCTGACACAGCGAAGTACATTGTGCGCTACAAAACGCACTCACCCCACTCGGACTGGGTATCAGTGTTACGAAATAAGACCGGCAGTGGTCGTGATACAGTGATCATGTTGGACGGCTTATATCCTTACACGAAGTACCTGATGGAGGTAGCATCTTATTACAAAGATGGCGACGAGGGACCGTATAGTGTACCACATCCGTTTGAGACAGAACAAGCAGCCCCAAGCGGTCCTCCTCGTGATGTCGTGATCATACCACGTGGTAAAAACACCATCAGAGTGTCCTGGTCCATCCCCAGTGCTAAAGACAGCAACGGTAAAATCACCAAATACGAGGTCGTGCTCTACAAGCCGAGTGGTGATAAGGAAACGTTCATGAATGAAGAGAAGACACTGTCAAAGGATATTAGTGACCTGGAAACTAATCAACAGTATTACATTGGCGTGCGGGCTTACACCAAGGTGGGGCCTGGGCCCTACAGCAGCAATATCACTTATTCGACAGAAGAAACAAACCAAGGATCGCAAATAACGCGTGCATTAGAGAAACTTAACAAGGTCCCAGTAACAGATAACAACGCTCTTAAAGTTATGAAAGAAGTCAAGAATATTACGTCGAAGTCTTCGGAGTTGTTGGAGAAGGACATCTCCCTTACAGCAAACATCCTTAAAAAAATCGTCAAGACAAACGCAACGTCAGCTGATGTGGGTGATCACGTGCTAGATACCATTAGTCACGTGATGGATGCTAAGACTGACGTGCTACAAAAAACTCAAAAAAAGTACAACACATCAGCTAAATTTGTCAAGTTACTTGACGAGTATCTCGAGAAGGGCGGAAAGTTCAGCAAAAGTACCTCGAACATTGCTGTTCATACACAGTTAGTTAAACACGGGATTCACTTGTCAGTTCAAACGACCAAGGACAAGATCGCTTTTAACACAACCGAAAATTCGACAAGCGGCGAAAACTTGGAAAACGAAGCTAGTGTGACCGTGCCTGCCTCGGTTGTGAACACAACTGACAATACCACGTTGATTGTTGTTTACTATCGAACAAGCAAGCTTTTTGCGCCAGATTATCGCAAAACGGAGGTATGTGAGGATAGCTTTACTACAGAAAAGATGTCCAAAGTGGAACCGTCGTCGCGTTCTTCGCGTTATACAATGGAGAACTCTACTGGTGATGTCGTCACCGAGAGCAGTCCCGTGCTCTCTGCAAGCTTAAGGAAAAAACACGTGGCGAATCTGACCACGCCCGTTATTATCAAGTTCAAAATGCCTCATGACCAGATTGTCGAAAACAGCACAAGGTGTGTCTGGTGGGATTTCGAAAAAAGTGGATGGTCCACTGAGGGGTGTTCTCTTCGCGGCATAGTTAATGACACAATCATTTGCGAATGTAATCACATGACCAACTTTGCAGCCTTAGTGGATGTGGATGATCACTCGAGGGCGTGTGGCAAACACTCTAAGGTGCTGTCACTCATCAGCTACATTGGCTGCGCATTGTCTATTTTGGGATTGTCGCTGACCATTTTCACTTTTGGATTTTTCAAGAAGCTTCGAAAGGATCAGATTGCAGCTAAGATTCTACTACACCTGTGTGCCTCGCTTCTGTGTGTGCTGATCGTGTTTGTCGCAGGGGTGGAGAGGGGCGGGGTGTCTGAGGACGTGTGCCGGATCGTAGCAGCACTCGTTCATTATTTCTTACTTGTCGCGTTTTTATGGATGTTGATCGAGGCTTACTTCATGTATCAAGCATTTGTCAAAGTGTTCAGAGACTATGGGGATTACGTCATGTGGAAATGTGCCGCAATGGGGTGGGGGATTCCATTTATCGTTGTAATCATCACGCTTGCTGTGGATAAAAGCAGCTATGGCGGAAAACACTATTGCCGTATTGGAGACATAGCATTCTTTGCAGCTTTCATGGCTCCCGTGTTGCTTGTCATTCTCATCAACACAGCTACGTTCTCGTTAATCATGTACAAACTAGCGACACGTCCACCAAACGCCGCTGACCCGGACCGTGGCACTGAAGGGCTTCTTAAAATCAAAAGAGCGTTTGGAATTCTTATTCTAGTCGGCATCACATGGATGTTTGGGTTCTTCGCCATAAGTGAAGCTCGTCTGGTGTTCCAGTATCTCTTCGCCATTTTTAACAGTCTTCAAGGCTTTGCAATCTTCGTGTTTTATTGTGTGATTCAAAAGAAAGTCCGCGAGTGTTGGTGGGCTCTTTTGACCTGTAATCTGCGCAGTCTCAATAAGTCGAAGTCGCTGTACACGGACTCGTATGACCGCAGGCGGCTGTCTTCAGCCAGCAGGGTTCAGCTTGATGCTATGAGGGCAAGGAGTAACACCAACCTGTCTCAGGTGATGCAAATGCCGTTACGTAAAGTAAGCAGTGTCCCGGATGTGATTGTCGATAAAGTTGGCAGGAATAATTGTCATTACCATAGCAACATGGTTTACGAAGACGACCGAGCCCAGGTGCCTACTGTGTCAATTGAACCAAGCGATTATCAGCTTAGCGGAAGCCAGGGAATAGAAGTCAACGAATCTATGGACGAACTTGCCACGAGATTGTCATATCGTTCTGGGTCCAGAACACCAAGTCTCAGATCCCACGCGCTCACTGTCACGCAATCTCGAGATCCTAGCGTTCGTGGCTCGTATGTCACGGTGAATTCTGCGCGGTCAACACCGAAGGTACCCCCCAGGGTACCACGCATCAACGGTCTGCGCTCGGCTGGAGCGCTTAATTGGTCACGCGAGTGTATGCCCGCGAAAGAGACTCTGAAAAGAACTGTGTCACACACTCCTGAGGTGCAGAGACCGGCAAATAACGGCTCGTCTCTCAGAAGAACTTGTTCATTAGGGGATCAAATGCGATTTAGCGCAGATTTTAGTGTGTGCAGTGATCAGACTTCATGCGAATCTCTGAGCTCAGAAGCTCAAACTCCCACGATAAAGAAGCATCTTGGCCTTCCATTTGAAAACCTTGGTGAGCAGATTGTAAGCCCACTAAGAGGTTCAGTTCGAGGAATTGTTGGATATGTTGAAACGACTGTGGAAAATTTTGACTTATTAATTGACTTGGAGAGGCAAAGATCGTTGTCTTCTCCCGTGACAACACTTCATCAAGTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZP9	Adhesion G-protein coupled receptor G2 OS=Homo sapiens OX=9606 GN=ADGRG2 PE=1 SV=2
Q8CJ11	Adhesion G-protein coupled receptor G2 OS=Rattus norvegicus OX=10116 GN=Adgrg2 PE=1 SV=1
Q8CJ12	Adhesion G-protein coupled receptor G2 OS=Mus musculus OX=10090 GN=Adgrg2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004179 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF00047 all species →	ig	Immunoglobulin domain	Domain	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013151 all species →	Domain	Immunoglobulin	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45692 all species →	G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04593	ADGRL2, LPHN2; adhesion G protein-coupled receptor L2	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.