Gene detail

Detailed information of evm.model.Ap14.725 in Astrangia poculata

Genomic Location: Ap14:7816335...7844155
NR annotation: XP_020631553.1, uncharacterized protein LOC110068516 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap14.725

atggctggagcaaggctttattcagtggtatttctattggtgttggcgtcgaggtttagctttcaagacatagttgatcacagaggaagggaattcgtccttagcttcgtttcgcagcatattcgatttccctacgatggaaataatgtgctttacatttcgagttttgaagacactcaaactcgcgtccatgttcctgcccttgcacaacagtcagaccaacagtacgaattgcgggcgggaggagtcaaaataatttctcttcccggtagtacgcggactggtagctctacagggattgagaaaaagaaaggaattcgaattactggagatgaacccatatcagtgcaaggactgtcaatattgagtgactcgggcgaagggtttcttgggttgcctgtggaaacgctcgggacgtactacatcgtatcgacgtttgctgtagttatcaacgctgtcttgcaggtcgtggcaaaagaagacaacactgaagtatccattaatctacggctaccacaaaatggtagagtgcggtatggcgaagtgacctattacaacggccaagacatcaacgtaacgctaaacgacttagatgtgtttcaagtactggccgattctgacctcaccggtacatctgtgacgtcatcgaaaccaatcgcggtgttttctgggaatgattgtgccatggtgccaaagttacaacagccttgtaatcacttagttgagcaactcccccctgttaatcattgggggacgcagttcatcactaaccctacgcctaaccgacaggggggagatatatttcatgtcatagcatcggcgcaaaatacacttgtctatgatgactcgcagtatcaaacccgactaaacaagggagaaacatttaaaattattgcctcttggaatgaatctaaagtcatatccacgtctcgccccagtcttgttgtgcaatattccagcggaactggaagtccatcgatgagcttagtgcccccaaacgaatggttctcaaatgactacaccgtttatgttccaaaggatgaaaaaggcaacgcatttgatagctacataaatgttgttatcgataccagattccgcggcggtcttcatgttaaaggcgcaaatgatctgattaactgggagattatttcaggaggattctccagagcttcgcttcctctccccagtgatggtgtctatcatgtttaccacaaggacccattagcgattttttccgctgttctgttcggcatgactcctaaaaagctatttgcgtttccagttggtatgaaacggttacaaccatgggatgcgagttgttcgccaacgaacacaacaggaggtgataaaattgataacgattgtgatggagccactgacgaagaattagccaatggcgtggacgacgatggcgatggaagaatcgacgaagatcttgtcacgccagcgcctgttttgaacgtgccgagagatttcgtgacaccgccactgctgtcatgcgacagatcatcaaatgtagccaatgttgaaaatacaggactagcaaagggttcagcacaaggcgtttgtaaaatacgcggtggaaaaataaccatctcgaacaaggacaatattgtagattcgcaaagttgtgagcgtgaacttgaccgagtttggactctgaaagatccttgtcagaatgttatcgagggtcaccagcgtattaagataagcaccccagaagatccaaaaatcacttttccagatgatgtaacttttacctgccgggaaaagaagtatctagggccaaaattcactggagaagttaaagtgactgcaagctcatgtccaagaaatgtgacagtcactcaccgtgacgcatacagtggttgttcggacagggaggggagactagatcgatcgtggacggttcaggacaaatgcaagcaaagttcaaaacgaatacaagttatcaggcttttaccaaaagaatcaagaagaacaactaactacgtggtgttatttaagataacaagcgaggcgttttcggttgagcttaaagataagaaatcctcgtccttcaaatctttggctgacggtttggaactcgagttagggaaaacatttacgcaatcaaagtcaaaatttggacgattctttgtagcagctacgacgctgggtttcagcaatggtagtgttattccgagcatgctcattaagatcgacgcagaggctcaatttgatcagcggcagttggttgacttcatgaactccaccgtgaaaagtggcacgctgggaaaatatcaagtggattctagttcagttcaatcaacagattttgatgaatgtcaagcacctcacctcaacgagtgtcacgagaaagcgaaatgcaccaacactcttggttcatataattgtacttgtatagatggatattatggtgatggttttctatgtcaagcgccaccttcaatctattacgttgatcctccaaccgaggctggcactgaggaaaacgtgacacttacctgtcacgctaatggtcttccagaaccaacattcacttggattacacccgacgggtacgctgttaacgcgacagagtcagtttacgaaattgaaatccttgatgatgatagtcaaaacaaaagaggccaaacacttcaaaaggatggttcactgttgatttttaacacccgtgttcatgaccaaggcatctacaaatgtgtagcgatcaatgttatgggacaggatgaacggagtgtcaatttaacagtgagagaagacctggtggaagtggaggcggctattactatcgaggaagaggtattcgacaaggatttggaaaacaagtcttctgtaagatatcaggcaatagagaaacaagttgaacaggagttaactgctttgttcaaggacatcaaaggcttcgaaagagttataattcttggattttataatggaagcgtcaaagtacgttttcgagttgttgttcaagtcaaaaaagaaaacaaagagcctacggtgatagctaacaaagttggtaaaactctcagagttagtgtgaaaaatggtcagataggcagccttaaagtgaagccaactgttgagttaagagaacgtcctccaccgcccgttgatgtccagtcagctgatgtcaaacaaactgaagctgtaatcacgtggtcacatcctgaactatatgacatgtacgccataagtagttactcactgcaaattagaaagtttggaacaaccaaatggacacagttcaccactactcgtggcgaaaaccacaggcttaccaatcttgatcccgatactgcttactttgtgcgactgaaatccgaaaacaagtatggaaaaggagaagctagtgaaagcggagaactcaaaactgaaaaagagggaagtggagccgaattagcattagccatagttcttcctctgttgctgttgataatactggctattgtagccgttttcgtgtacagaagatggaaaaagaagggaaaacggagtggatatcaaaccactgacgaggaagtccccatgaaccgagtcacagcagaaccgcgaaaccaagcgggcgaagggttcatgacctttggccaggaacgttacgccccaataccaggtgaaacagcaaacggcgcaagcgcagtgcagatacaagcctcgtttgcgtggcgtgagataccacgtgaccgcatcactcttggcaaagttcttggagaaggcgagtttggaatggtggtcaaaggagagttgactgaagatgacggtcacatcacacattgtgccgtgaaaaagttgaaacgtactgccacagaaagtgattttaaagatttgctgaatgagctcgagatattgaaggatgtgggtaatcaccctaacctggtcaaccttatcggtgcatgctcaactggaggaccgttgatgattgtcgtagaattcgctgaacacggcaacctcttgcgttaccttcgtgatcaccgaaagcaaaactacgacgacatgaacgaatacagtttggacataagctccgcggagagactgaggatagcgtgtgacgtgtctaacggaatgaaacatcttgctttcatgaagtgcgcgcacagggacttggcggcgagaaatgttcttcttggagagggaatggtagctaaagtctccgattttggcctgtcacgtgatatctacactgaccagtacgagaggaaaactggggggaagcttccggcaaaatggatggcggtggaatctcttgtgcaaggcatctccacgagccaaagtgatgtatggtcgtttggtgtcctactttgggaaatcgaaaccggaggctgtgctccatacgctgggatggttatgagcgaattgcagtccaagctgcaggcaggacatcgtttggataaacctcgctactgcaccgactggctatacgctgtgatgcttcgctgctggaatgcgaatccgaagttgaggccgacatttgaggagctgagtgatgaacttcatcgaatgctcacacaagaaacagactatttgactccagacgacttcaaaggagagccaagttatgttaacacctcaaaggaaaacatatcctcggcctaa

Transcript

evm.model.Ap14.725

ATGGCTGGAGCAAGGCTTTATTCAGTGGTATTTCTATTGGTGTTGGCGTCGAGGTTTAGCTTTCAAGACATAGTTGATCACAGAGGAAGGGAATTCGTCCTTAGCTTCGTTTCGCAGCATATTCGATTTCCCTACGATGGAAATAATGTGCTTTACATTTCGAGTTTTGAAGACACTCAAACTCGCGTCCATGTTCCTGCCCTTGCACAACAGTCAGACCAACAGTACGAATTGCGGGCGGGAGGAGTCAAAATAATTTCTCTTCCCGGTAGTACGCGGACTGGTAGCTCTACAGGGATTGAGAAAAAGAAAGGAATTCGAATTACTGGAGATGAACCCATATCAGTGCAAGGACTGTCAATATTGAGTGACTCGGGCGAAGGGTTTCTTGGGTTGCCTGTGGAAACGCTCGGGACGTACTACATCGTATCGACGTTTGCTGTAGTTATCAACGCTGTCTTGCAGGTCGTGGCAAAAGAAGACAACACTGAAGTATCCATTAATCTACGGCTACCACAAAATGGTAGAGTGCGGTATGGCGAAGTGACCTATTACAACGGCCAAGACATCAACGTAACGCTAAACGACTTAGATGTGTTTCAAGTACTGGCCGATTCTGACCTCACCGGTACATCTGTGACGTCATCGAAACCAATCGCGGTGTTTTCTGGGAATGATTGTGCCATGGTGCCAAAGTTACAACAGCCTTGTAATCACTTAGTTGAGCAACTCCCCCCTGTTAATCATTGGGGGACGCAGTTCATCACTAACCCTACGCCTAACCGACAGGGGGGAGATATATTTCATGTCATAGCATCGGCGCAAAATACACTTGTCTATGATGACTCGCAGTATCAAACCCGACTAAACAAGGGAGAAACATTTAAAATTATTGCCTCTTGGAATGAATCTAAAGTCATATCCACGTCTCGCCCCAGTCTTGTTGTGCAATATTCCAGCGGAACTGGAAGTCCATCGATGAGCTTAGTGCCCCCAAACGAATGGTTCTCAAATGACTACACCGTTTATGTTCCAAAGGATGAAAAAGGCAACGCATTTGATAGCTACATAAATGTTGTTATCGATACCAGATTCCGCGGCGGTCTTCATGTTAAAGGCGCAAATGATCTGATTAACTGGGAGATTATTTCAGGAGGATTCTCCAGAGCTTCGCTTCCTCTCCCCAGTGATGGTGTCTATCATGTTTACCACAAGGACCCATTAGCGATTTTTTCCGCTGTTCTGTTCGGCATGACTCCTAAAAAGCTATTTGCGTTTCCAGTTGGTATGAAACGGTTACAACCATGGGATGCGAGTTGTTCGCCAACGAACACAACAGGAGGTGATAAAATTGATAACGATTGTGATGGAGCCACTGACGAAGAATTAGCCAATGGCGTGGACGACGATGGCGATGGAAGAATCGACGAAGATCTTGTCACGCCAGCGCCTGTTTTGAACGTGCCGAGAGATTTCGTGACACCGCCACTGCTGTCATGCGACAGATCATCAAATGTAGCCAATGTTGAAAATACAGGACTAGCAAAGGGTTCAGCACAAGGCGTTTGTAAAATACGCGGTGGAAAAATAACCATCTCGAACAAGGACAATATTGTAGATTCGCAAAGTTGTGAGCGTGAACTTGACCGAGTTTGGACTCTGAAAGATCCTTGTCAGAATGTTATCGAGGGTCACCAGCGTATTAAGATAAGCACCCCAGAAGATCCAAAAATCACTTTTCCAGATGATGTAACTTTTACCTGCCGGGAAAAGAAGTATCTAGGGCCAAAATTCACTGGAGAAGTTAAAGTGACTGCAAGCTCATGTCCAAGAAATGTGACAGTCACTCACCGTGACGCATACAGTGGTTGTTCGGACAGGGAGGGGAGACTAGATCGATCGTGGACGGTTCAGGACAAATGCAAGCAAAGTTCAAAACGAATACAAGTTATCAGGCTTTTACCAAAAGAATCAAGAAGAACAACTAACTACGTGGTGTTATTTAAGATAACAAGCGAGGCGTTTTCGGTTGAGCTTAAAGATAAGAAATCCTCGTCCTTCAAATCTTTGGCTGACGGTTTGGAACTCGAGTTAGGGAAAACATTTACGCAATCAAAGTCAAAATTTGGACGATTCTTTGTAGCAGCTACGACGCTGGGTTTCAGCAATGGTAGTGTTATTCCGAGCATGCTCATTAAGATCGACGCAGAGGCTCAATTTGATCAGCGGCAGTTGGTTGACTTCATGAACTCCACCGTGAAAAGTGGCACGCTGGGAAAATATCAAGTGGATTCTAGTTCAGTTCAATCAACAGATTTTGATGAATGTCAAGCACCTCACCTCAACGAGTGTCACGAGAAAGCGAAATGCACCAACACTCTTGGTTCATATAATTGTACTTGTATAGATGGATATTATGGTGATGGTTTTCTATGTCAAGCGCCACCTTCAATCTATTACGTTGATCCTCCAACCGAGGCTGGCACTGAGGAAAACGTGACACTTACCTGTCACGCTAATGGTCTTCCAGAACCAACATTCACTTGGATTACACCCGACGGGTACGCTGTTAACGCGACAGAGTCAGTTTACGAAATTGAAATCCTTGATGATGATAGTCAAAACAAAAGAGGCCAAACACTTCAAAAGGATGGTTCACTGTTGATTTTTAACACCCGTGTTCATGACCAAGGCATCTACAAATGTGTAGCGATCAATGTTATGGGACAGGATGAACGGAGTGTCAATTTAACAGTGAGAGAAGACCTGGTGGAAGTGGAGGCGGCTATTACTATCGAGGAAGAGGTATTCGACAAGGATTTGGAAAACAAGTCTTCTGTAAGATATCAGGCAATAGAGAAACAAGTTGAACAGGAGTTAACTGCTTTGTTCAAGGACATCAAAGGCTTCGAAAGAGTTATAATTCTTGGATTTTATAATGGAAGCGTCAAAGTACGTTTTCGAGTTGTTGTTCAAGTCAAAAAAGAAAACAAAGAGCCTACGGTGATAGCTAACAAAGTTGGTAAAACTCTCAGAGTTAGTGTGAAAAATGGTCAGATAGGCAGCCTTAAAGTGAAGCCAACTGTTGAGTTAAGAGAACGTCCTCCACCGCCCGTTGATGTCCAGTCAGCTGATGTCAAACAAACTGAAGCTGTAATCACGTGGTCACATCCTGAACTATATGACATGTACGCCATAAGTAGTTACTCACTGCAAATTAGAAAGTTTGGAACAACCAAATGGACACAGTTCACCACTACTCGTGGCGAAAACCACAGGCTTACCAATCTTGATCCCGATACTGCTTACTTTGTGCGACTGAAATCCGAAAACAAGTATGGAAAAGGAGAAGCTAGTGAAAGCGGAGAACTCAAAACTGAAAAAGAGGGAAGTGGAGCCGAATTAGCATTAGCCATAGTTCTTCCTCTGTTGCTGTTGATAATACTGGCTATTGTAGCCGTTTTCGTGTACAGAAGATGGAAAAAGAAGGGAAAACGGAGTGGATATCAAACCACTGACGAGGAAGTCCCCATGAACCGAGTCACAGCAGAACCGCGAAACCAAGCGGGCGAAGGGTTCATGACCTTTGGCCAGGAACGTTACGCCCCAATACCAGGTGAAACAGCAAACGGCGCAAGCGCAGTGCAGATACAAGCCTCGTTTGCGTGGCGTGAGATACCACGTGACCGCATCACTCTTGGCAAAGTTCTTGGAGAAGGCGAGTTTGGAATGGTGGTCAAAGGAGAGTTGACTGAAGATGACGGTCACATCACACATTGTGCCGTGAAAAAGTTGAAACGTACTGCCACAGAAAGTGATTTTAAAGATTTGCTGAATGAGCTCGAGATATTGAAGGATGTGGGTAATCACCCTAACCTGGTCAACCTTATCGGTGCATGCTCAACTGGAGGACCGTTGATGATTGTCGTAGAATTCGCTGAACACGGCAACCTCTTGCGTTACCTTCGTGATCACCGAAAGCAAAACTACGACGACATGAACGAATACAGTTTGGACATAAGCTCCGCGGAGAGACTGAGGATAGCGTGTGACGTGTCTAACGGAATGAAACATCTTGCTTTCATGAAGTGCGCGCACAGGGACTTGGCGGCGAGAAATGTTCTTCTTGGAGAGGGAATGGTAGCTAAAGTCTCCGATTTTGGCCTGTCACGTGATATCTACACTGACCAGTACGAGAGGAAAACTGGGGGGAAGCTTCCGGCAAAATGGATGGCGGTGGAATCTCTTGTGCAAGGCATCTCCACGAGCCAAAGTGATGTATGGTCGTTTGGTGTCCTACTTTGGGAAATCGAAACCGGAGGCTGTGCTCCATACGCTGGGATGGTTATGAGCGAATTGCAGTCCAAGCTGCAGGCAGGACATCGTTTGGATAAACCTCGCTACTGCACCGACTGGCTATACGCTGTGATGCTTCGCTGCTGGAATGCGAATCCGAAGTTGAGGCCGACATTTGAGGAGCTGAGTGATGAACTTCATCGAATGCTCACACAAGAAACAGACTATTTGACTCCAGACGACTTCAAAGGAGAGCCAAGTTATGTTAACACCTCAAAGGAAAACATATCCTCGGCCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91285	Fibroblast growth factor receptor 1 OS=Pleurodeles waltl OX=8319 GN=FGFR1 PE=2 SV=1
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3
P16092	Fibroblast growth factor receptor 1 OS=Mus musculus OX=10090 GN=Fgfr1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001017 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF17517 all species →	IgGFc_binding	IgGFc binding protein	Family	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR035234 all species →	Domain	IgGFc-binding protein, N-terminal	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap14.725.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.