Gene detail

Detailed information of evm.model.Ap14.741 in Astrangia poculata

Genomic Location: Ap14:7998794...8017998
NR annotation: XP_029197542.2, protein HGV2-like isoform X1 [Acropora millepora]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02508	Protein HGV2 OS=Halocynthia roretzi OX=7729 GN=HGV2 PE=2 SV=1
Q66HD3	Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1
P06180	Histone-binding protein N1/N2 OS=Xenopus laevis OX=8355 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003880 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10516 all species →	SHNi-TPR	SHNi-TPR	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR051730 all species →	Family	Nuclear Autoantigenic Sperm-associated Protein	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019544 all species →	Domain	Tetratricopeptide, SHNi-TPR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15081 all species →	NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0006335 all species →	Biological Process	DNA replication-dependent chromatin assembly	Interproscan
GO:0034080 all species →	Biological Process	CENP-A containing chromatin assembly	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11291	NASP; nuclear autoantigenic sperm protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.