Detailed information of evm.model.Ap14.754 in Astrangia poculata

Genomic Location: Ap14:8138378...8141774
NR annotation: XP_020627232.1, calmodulin-A-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q40302Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
P04464Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
P05419Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010426 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR001751
all species →		Conserved_siteS100/Calcium binding protein 7/8-like, conserved siteInterproscan
IPR050145
all species →		FamilyCalmodulin and Centrin Calcium-Binding FamiliesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23050
all species →		CALCIUM BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06268PPP3R, CNB; serine/threonine-protein phosphatase 2B regulatory subunit-Protein phosphatases and associated proteinsko01009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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