Detailed information of evm.model.Ap2.1140 in Astrangia poculata

Genomic Location: Ap2:11708444...11718099
NR annotation: XP_020610503.1, tRNA (guanine(26)-N(2))-dimethyltransferase-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NXH9tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens OX=9606 GN=TRMT1 PE=1 SV=1
Q3TX08tRNA (guanine(26)-N(2))-dimethyltransferase OS=Mus musculus OX=10090 GN=Trmt1 PE=1 SV=3
Q9VK89tRNA (guanine(26)-N(2))-dimethyltransferase OS=Drosophila melanogaster OX=7227 GN=Trm1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005103 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02005
all species →		TRMN2,N2-dimethylguanosine tRNA methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002905
all species →		FamilytRNA methyltransferase, Trm1Interproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR042296
all species →		Homologous_superfamilytRNA methyltransferase, Trm1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10631
all species →		N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0160102
all species →		Molecular FunctiontRNA (guanine(10)-N2)-methyltransferase activityInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0002940
all species →		Biological ProcesstRNA N2-guanine methylationInterproscan
GO:0004809
all species →		Molecular Functionobsolete tRNA (guanine-N2-)-methyltransferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00555TRMT1, trm1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferaseEC:2.1.1.215
EC:2.1.1.216
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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