Detailed information of evm.model.Ap2.1158 in Astrangia poculata

Genomic Location: Ap2:11914541...11917479
NR annotation: CAB3260284.1, unnamed protein product [Arctia plantaginis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000002 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13650
all species →		Asp_protease_2Aspartyl proteaseDomainInterproscan
PF17921
all species →		Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951
all species →		FamilyRetrovirus-related Pol polyproteinInterproscan
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR041588
all species →		DomainIntegrase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →		PROTEIN CBG26694Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap2.1158. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.1158.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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