Detailed information of evm.model.Ap2.1214 in Astrangia poculata

Genomic Location: Ap2:12430316...12446610
NR annotation: PFX28391.1, Polycystic kidney disease and receptor for egg jelly-related protein [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P00451Coagulation factor VIII OS=Homo sapiens OX=9606 GN=F8 PE=1 SV=1
P12263Coagulation factor VIII OS=Sus scrofa OX=9823 GN=F8 PE=1 SV=2
Q0V8T3Contactin-associated protein like 5-4 OS=Rattus norvegicus OX=10116 GN=Cntnap5d PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000040 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825
all species →		GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF02010
all species →		REJREJ domainFamilyInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR035986
all species →		Homologous_superfamilyPKD domain superfamilyInterproscan
IPR046338
all species →		Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR000203
all species →		Conserved_siteGPS motifInterproscan
IPR002859
all species →		DomainPKD/REJ-like domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000601
all species →		DomainPKD domainInterproscan
IPR014010
all species →		DomainREJ domainInterproscan
IPR022409
all species →		DomainPKD/Chitinase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730
all species →		POLYCYSTIN-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005261
all species →		Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006816
all species →		Biological Processcalcium ion transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.1214.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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