Detailed information of evm.model.Ap2.1618 in Astrangia poculata

Genomic Location: Ap2:17263908...17278177
NR annotation: KXJ17830.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q59RQ0ATP-dependent DNA helicase PIF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PIF1 PE=1 SV=2
Q196V4Uncharacterized protein 106R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-106R PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000131 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan
PF20209
all species →		DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF14214
all species →		Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF04843
all species →		Herpes_teg_NHerpesvirus tegument protein, N-terminal conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051055
all species →		FamilyPIF1 DNA helicaseInterproscan
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR046700
all species →		DomainDomain of unknown function DUF6570Interproscan
IPR025476
all species →		DomainHelitron helicase-like domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR006928
all species →		DomainHerpesvirus large tegument protein, USP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →		ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.1618.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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