Detailed information of evm.model.Ap2.1703 in Astrangia poculata

Genomic Location: Ap2:18416642...18419141
NR annotation: KAJ7376208.1, hypothetical protein OS493_036029 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P46638Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=3
P22129Ras-related protein Rab-11B OS=Diplobatis ommata OX=1870830 PE=2 SV=1
Q3MHP2Ras-related protein Rab-11B OS=Bos taurus OX=9913 GN=RAB11B PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →		RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001806
all species →		FamilySmall GTPaseInterproscan
IPR050209
all species →		FamilyRab GTPases family involved in membrane traffickingInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47979
all species →		DRAB11-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.1703.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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