Detailed information of evm.model.Ap2.1714 in Astrangia poculata

Genomic Location: Ap2:18515009...18521864
NR annotation: KAJ7376215.1, Syntaxin-18 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P2W9Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1
Q5REB4Syntaxin-18 OS=Pongo abelii OX=9601 GN=STX18 PE=2 SV=1
Q4VBI7Syntaxin-18 OS=Danio rerio OX=7955 GN=stx18 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005970 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10496
all species →		Syntaxin-18_NSNARE-complex protein Syntaxin-18 N-terminus DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019529
all species →		DomainSNARE-complex protein Syntaxin-18, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15959
all species →		SYNTAXIN-18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006890
all species →		Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.1714.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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