Detailed information of evm.model.Ap2.1780 in Astrangia poculata

Genomic Location: Ap2:19033531...19035352
NR annotation: XP_020606933.1, early growth response protein 1-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P26632Early growth response protein 1 OS=Danio rerio OX=7955 GN=egr1 PE=2 SV=2
P08154Early growth response protein 1 OS=Rattus norvegicus OX=10116 GN=Egr1 PE=1 SV=2
P08046Early growth response protein 1 OS=Mus musculus OX=10090 GN=Egr1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006020 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23235
all species →		KRUEPPEL-LIKE TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09203EGR1; early growth response protein 1-Transcription factorsko03000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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