Gene detail

Detailed information of evm.model.Ap2.1868 in Astrangia poculata

Genomic Location: Ap2:20086686...20088116
NR annotation: XP_020619240.1, DELTA-thalatoxin-Avl2a-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P58912	DELTA-alicitoxin-Pse2b OS=Phyllodiscus semoni OX=163701 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000877 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01823 all species →	MACPF	MAC/Perforin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020864 all species →	Domain	Membrane attack complex component/perforin (MACPF) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45742 all species →	COMPLEMENT COMPONENT C6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07818	PRF1; perforin 1	-	Type I diabetes mellitus	ko04940	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.