Gene detail

Detailed information of evm.model.Ap2.1913 in Astrangia poculata

Genomic Location: Ap2:20560034...20568906
NR annotation: XP_020619187.1, BRISC complex subunit Abro1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q15018	BRISC complex subunit Abraxas 2 OS=Homo sapiens OX=9606 GN=ABRAXAS2 PE=1 SV=2
Q6GR31	BRCA1-A complex subunit Abraxas 1 OS=Xenopus laevis OX=8355 GN=abraxas1 PE=2 SV=1
Q3TCJ1	BRISC complex subunit Abraxas 2 OS=Mus musculus OX=10090 GN=Abraxas2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007692 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21125 all species →	MPN_2A_DUB_like	BRCA1-A complex subunit Abraxas 1 MPN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023238 all species →	Family	FAM175 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31728 all species →	ABRAXAS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031593 all species →	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20799	FAM175B, ABRO1; BRISC complex subunit Abro1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.