Detailed information of evm.model.Ap2.2492 in Astrangia poculata

Genomic Location: Ap2:26247945...26255443
NR annotation: XP_027050460.1, ubiquitin-conjugating enzyme E2-17 kDa [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25867Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster OX=7227 GN=eff PE=1 SV=1
P35129Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans OX=6239 GN=let-70 PE=1 SV=1
P61077Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens OX=9606 GN=UBE2D3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000643 (this species only)
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UEV · all ubiquitin genes in this species
Ubiquitin familyE2|UEV|UEV · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan
IPR023313
all species →		Active_siteUbiquitin-conjugating enzyme, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24068
all species →		UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0061631
all species →		Molecular Functionubiquitin conjugating enzyme activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.2492.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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