Detailed information of evm.model.Ap2.2494 in Astrangia poculata

Genomic Location: Ap2:26267478...26275521
NR annotation: XP_027050464.1, ubiquitin-conjugating enzyme E2-17 kDa-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25867Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster OX=7227 GN=eff PE=1 SV=1
P35129Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans OX=6239 GN=let-70 PE=1 SV=1
P61077Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens OX=9606 GN=UBE2D3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000643 (this species only)
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UEV · all ubiquitin genes in this species
Ubiquitin familyE2|UEV|UEV · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR023313
all species →		Active_siteUbiquitin-conjugating enzyme, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24068
all species →		UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0061631
all species →		Molecular Functionubiquitin conjugating enzyme activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06689UBE2D, UBC4, UBC5; ubiquitin-conjugating enzyme E2 DEC:2.3.2.23
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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