Detailed information of evm.model.Ap2.2828 in Astrangia poculata

Genomic Location: Ap2:29021872...29022594
NR annotation: XP_020619307.1, uncharacterized protein LOC110057066 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002846 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap2.2828. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR039142
all species →		FamilyNRF1/Ewg familyInterproscan
IPR000697
all species →		DomainWH1/EVH1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20338
all species →		NUCLEAR RESPIRATORY FACTOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.2828.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP