Detailed information of evm.model.Ap2.3210 in Astrangia poculata

Genomic Location: Ap2:32540847...32549629
NR annotation: KAJ7383620.1, hypothetical protein OS493_026806 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8WH18Cytosolic Fe-S cluster assembly factor narfl OS=Xenopus tropicalis OX=8364 GN=narfl PE=2 SV=1
A2RRV9Cytosolic Fe-S cluster assembly factor narfl OS=Danio rerio OX=7955 GN=narfl PE=2 SV=1
Q5BK18Cytosolic iron-sulfur assembly component 3 OS=Rattus norvegicus OX=10116 GN=Ciao3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005194 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02256
all species →
Fe_hyd_SSUIron hydrogenase small subunitDomainInterproscan
PF02906
all species →
Fe_hyd_lg_CIron only hydrogenase large subunit, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050340
all species →
FamilyCytosolic Fe-S Cluster Assembly FactorInterproscan
IPR009016
all species →
Homologous_superfamilyIron hydrogenaseInterproscan
IPR036991
all species →
Homologous_superfamilyIron hydrogenase, small subunit superfamilyInterproscan
IPR003149
all species →
DomainIron hydrogenase, small subunitInterproscan
IPR004108
all species →
DomainIron hydrogenase, large subunit, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11615
all species →
NITRATE, FORMATE, IRON DEHYDROGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016226
all species →
Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361
all species →
Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3210.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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