Detailed information of evm.model.Ap2.3291.2.5f15e395 in Astrangia poculata

Genomic Location: Ap2:33322828...33336725
NR annotation: XP_020628332.1, staphylococcal nuclease domain-containing protein 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5REU4Staphylococcal nuclease domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SND1 PE=2 SV=1
Q7KZF4Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SND1 PE=1 SV=1
Q863B3Staphylococcal nuclease domain-containing protein 1 OS=Bos taurus OX=9913 GN=SND1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005312 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00565
all species →		SNaseStaphylococcal nuclease homologueDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016071
all species →		DomainStaphylococcal nuclease (SNase-like), OB-foldInterproscan
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12302
all species →		EBNA2 BINDING PROTEIN P100Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006402
all species →		Biological ProcessmRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3291.2.5f15e395.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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