Detailed information of evm.model.Ap2.3299 in Astrangia poculata

Genomic Location: Ap2:33414345...33416330
NR annotation: KAJ7377349.1, hypothetical protein OS493_029708 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011275 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02900
all species →		LigBCatalytic LigB subunit of aromatic ring-opening dioxygenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004183
all species →		DomainExtradiol ring-cleavage dioxygenase, class III enzyme, subunit BInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap2.3299. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006725
all species →		Biological Processobsolete cellular aromatic compound metabolic processInterproscan
GO:0008198
all species →		Molecular Functionferrous iron bindingInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06990MEMO1; MEMO1 family protein-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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