Detailed information of evm.model.Ap2.3318 in Astrangia poculata

Genomic Location: Ap2:33705152...33711163
NR annotation: XP_020602802.1, 2',3'-cyclic-nucleotide 3'-phosphodiesterase-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3V2Q8NEDD4-binding protein 2-like 1 OS=Mus musculus OX=10090 GN=N4bp2l1 PE=1 SV=1
Q5TBK1NEDD4-binding protein 2-like 1 OS=Homo sapiens OX=9606 GN=N4BP2L1 PE=1 SV=1
Q86UW6NEDD4-binding protein 2 OS=Homo sapiens OX=9606 GN=N4BP2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05881
all species →		CNPase2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)FamilyInterproscan
PF13671
all species →		AAA_33AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047325
all species →		DomainCyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008431
all species →		FamilyCyclic nucleotide phosphodiesteraseInterproscan
IPR009097
all species →		Homologous_superfamilyCyclic phosphodiesteraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10156
all species →		2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004113
all species →		Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009214
all species →		Biological Processcyclic nucleotide catabolic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01121CNP; 2',3'-cyclic-nucleotide 3'-phosphodiesteraseEC:3.1.4.37
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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