Detailed information of evm.model.Ap2.3349 in Astrangia poculata

Genomic Location: Ap2:34053467...34061506
NR annotation: KAJ7321494.1, Calmodulin-like protein 4 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05933Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1
Q9D6P8Calmodulin-like protein 3 OS=Mus musculus OX=10090 GN=Calml3 PE=2 SV=1
P41041Calmodulin OS=Pneumocystis carinii OX=4754 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005656 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050403
all species →		FamilyMyosin Regulatory Light ChainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23049
all species →		MYOSIN REGULATORY LIGHT CHAIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016460
all species →		Cellular Componentmyosin II complexInterproscan
GO:0032036
all species →		Molecular Functionmyosin heavy chain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02183CALM; calmodulin-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP