Detailed information of evm.model.Ap2.3599 in Astrangia poculata

Genomic Location: Ap2:36876139...36883692
NR annotation: XP_020616212.1, UBX domain-containing protein 6-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99PL6UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1
Q9BZV1UBX domain-containing protein 6 OS=Homo sapiens OX=9606 GN=UBXN6 PE=1 SV=1
Q2KIJ6UBX domain-containing protein 6 OS=Bos taurus OX=9913 GN=UBXN6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006234 (this species only)
Ubiquitin familyULD|UFD|UBX · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00789
all species →
UBXUBX domainDomainInterproscan
PF09409
all species →
PUBPUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042774
all species →
DomainUBXN6, PUB domainInterproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR036339
all species →
Homologous_superfamilyPUB-like domain superfamilyInterproscan
IPR001012
all species →
DomainUBX domainInterproscan
IPR018997
all species →
DomainPUB domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23153
all species →
UBX-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14011UBXN6, UBXD1; UBX domain-containing protein 6-Protein processing in endoplasmic reticulumko04141deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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