Detailed information of evm.model.Ap2.3754 in Astrangia poculata

Genomic Location: Ap2:38424818...38439306
NR annotation: XP_022801421.1, cytoplasmic protein NCK1-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99M51SH2/SH3 adapter protein Nck1 OS=Mus musculus OX=10090 GN=Nck1 PE=1 SV=1
P16333SH2/SH3 adapter protein NCK1 OS=Homo sapiens OX=9606 GN=NCK1 PE=1 SV=1
O55033Cytoplasmic protein NCK2 OS=Mus musculus OX=10090 GN=Nck2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004263 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653
all species →		SH3_2Variant SH3 domainDomainInterproscan
PF00018
all species →		SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →		DomainSH3 domainInterproscan
IPR050384
all species →		FamilyEndophilin/SH3RFInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14167
all species →		SH3 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3754.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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