Detailed information of evm.model.Ap2.3863 in Astrangia poculata

Genomic Location: Ap2:39641911...39642583
NR annotation: XP_015747906.1, PREDICTED: ras-related protein Rab-11A [Acropora digitifera]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2TA29Ras-related protein Rab-11A OS=Bos taurus OX=9913 GN=RAB11A PE=2 SV=3
P62490Ras-related protein Rab-11A OS=Canis lupus familiaris OX=9615 GN=RAB11A PE=2 SV=3
P62491Ras-related protein Rab-11A OS=Homo sapiens OX=9606 GN=RAB11A PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →		RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050209
all species →		FamilyRab GTPases family involved in membrane traffickingInterproscan
IPR001806
all species →		FamilySmall GTPaseInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47979
all species →		DRAB11-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006887
all species →		Biological ProcessexocytosisInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030133
all species →		Cellular Componenttransport vesicleInterproscan
GO:0032402
all species →		Biological Processmelanosome transportInterproscan
GO:0055037
all species →		Cellular Componentrecycling endosomeInterproscan
GO:0098837
all species →		Cellular Componentpostsynaptic recycling endosomeInterproscan
GO:0098887
all species →		Biological Processneurotransmitter receptor transport, endosome to postsynaptic membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3863.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP