Detailed information of evm.model.Ap2.3898 in Astrangia poculata

Genomic Location: Ap2:40139588...40147524
NR annotation: KAJ7393812.1, AP-4 complex subunit epsilon-1 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80V94AP-4 complex subunit epsilon-1 OS=Mus musculus OX=10090 GN=Ap4e1 PE=1 SV=3
Q9UPM8AP-4 complex subunit epsilon-1 OS=Homo sapiens OX=9606 GN=AP4E1 PE=1 SV=2
Q8L7A9AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002707 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01602
all species →
Adaptin_NAdaptin N terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002553
all species →
DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR050840
all species →
FamilyAdaptor Complexes Large SubunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22780
all species →
ADAPTIN, ALPHA/GAMMA/EPSILONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan
GO:0030117
all species →
Cellular Componentmembrane coatInterproscan
GO:0030124
all species →
Cellular ComponentAP-4 adaptor complexInterproscan
GO:0140312
all species →
Molecular Functioncargo adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3898.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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