Detailed information of evm.model.Ap2.3910 in Astrangia poculata

Genomic Location: Ap2:40331393...40336528
NR annotation: KAJ7393800.1, Thioredoxin-like protein 1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CDN6Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3
Q920J4Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3
O43396Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000679 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06201
all species →		PITHPITH domainDomainInterproscan
PF00085
all species →		ThioredoxinThioredoxinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR013766
all species →		DomainThioredoxin domainInterproscan
IPR010400
all species →		DomainPITH domainInterproscan
IPR017937
all species →		Conserved_siteThioredoxin, conserved siteInterproscan
IPR037047
all species →		Homologous_superfamilyPITH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46115
all species →		THIOREDOXIN-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0015035
all species →		Molecular Functionprotein-disulfide reductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3910.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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