Detailed information of evm.model.Ap2.3923 in Astrangia poculata

Genomic Location: Ap2:40478172...40485402
NR annotation: XP_020615490.1, CDC42 small effector protein 2-B-like isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5FVD7CDC42 small effector protein 2-A OS=Xenopus laevis OX=8355 GN=cdc42se2-a PE=3 SV=1
A1L1K4CDC42 small effector protein 2 OS=Rattus norvegicus OX=10116 GN=Cdc42se2 PE=3 SV=2
A6QLJ4CDC42 small effector protein 2 OS=Bos taurus OX=9913 GN=CDC42SE2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008295 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00786
all species →		PBDP21-Rho-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000095
all species →		DomainCRIB domainInterproscan
IPR036936
all species →		Homologous_superfamilyCRIB domain superfamilyInterproscan
IPR039056
all species →		FamilyCDC42 small effector proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13502
all species →		CDC42 SMALL EFFECTOR PROTEIN HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0035023
all species →		Biological Processregulation of Rho protein signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.3923.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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