Gene detail

Detailed information of evm.model.Ap2.3978 in Astrangia poculata

Genomic Location: Ap2:41100799...41105783
NR annotation: KAF7478441.1, hypothetical protein GHT09_010536 [Marmota monax]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4FV54	Ras-related protein Rab-8A OS=Bos taurus OX=9913 GN=RAB8A PE=1 SV=1
P61007	Ras-related protein Rab-8A OS=Canis lupus familiaris OX=9615 GN=RAB8A PE=1 SV=1
P61006	Ras-related protein Rab-8A OS=Homo sapiens OX=9606 GN=RAB8A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000048 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050305 all species →	Family	Small GTPase superfamily, Rab	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47980 all species →	LD44762P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006904 all species →	Biological Process	vesicle docking involved in exocytosis	Interproscan
GO:0008021 all species →	Cellular Component	synaptic vesicle	Interproscan
GO:0009306 all species →	Biological Process	protein secretion	Interproscan
GO:0017157 all species →	Biological Process	regulation of exocytosis	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap2.3978.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.