Detailed information of evm.model.Ap2.4085 in Astrangia poculata

Genomic Location: Ap2:42085090...42092716
NR annotation: XP_020606054.1, uncharacterized protein LOC110044807, partial [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000752 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09382
all species →		RQCRQC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR018982
all species →		DomainRQC domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap2.4085. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.4085.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP