Gene detail

Detailed information of evm.model.Ap2.465 in Astrangia poculata

Genomic Location: Ap2:4506606...4511001
NR annotation: XP_020614330.1, uncharacterized protein LOC110052542 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WYP5	Myo-inositol 2-dehydrogenase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=iolG PE=1 SV=1
O05389	Uncharacterized oxidoreductase YrbE OS=Bacillus subtilis (strain 168) OX=224308 GN=yrbE PE=3 SV=2
Q9KAH1	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=iolG PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002264 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02894 all species →	GFO_IDH_MocA_C	Oxidoreductase family, C-terminal alpha/beta domain	Domain	Interproscan
PF01408 all species →	GFO_IDH_MocA	Oxidoreductase family, NAD-binding Rossmann fold	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004104 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR000683 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42840 all species →	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006740 all species →	Biological Process	NADPH regeneration	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00010	iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase	EC:1.1.1.18 EC:1.1.1.369	Streptomycin biosynthesis	ko00521	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.