Detailed information of evm.model.Ap2.492 in Astrangia poculata

Genomic Location: Ap2:4916695...4920266
NR annotation: XP_027058790.1, transmembrane emp24 domain-containing protein 4-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z7H5Transmembrane emp24 domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TMED4 PE=1 SV=1
Q8R1V4Transmembrane emp24 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1
Q3T133Transmembrane emp24 domain-containing protein 9 OS=Bos taurus OX=9913 GN=TMED9 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006336 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01105
all species →		EMP24_GP25Lemp24/gp25L/p24 family/GOLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009038
all species →		DomainGOLD domainInterproscan
IPR015720
all species →		FamilyTransmembrane emp24 domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22811
all species →		TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0005793
all species →		Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0007030
all species →		Biological ProcessGolgi organizationInterproscan
GO:0030134
all species →		Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20346TMED4_9_11; p24 family protein alpha-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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