Genomic Location: Ap2:6423629...6435800
NR annotation: XP_027057253.1, BTB/POZ domain-containing protein KCTD9-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap2.647.1.5f15ddec |
| Transcript |
| evm.model.Ap2.647.1.5f15ddec |
| Protein |
| evm.model.Ap2.647.1.5f15ddec |
| UniProt accession | Description |
|---|---|
| Q7L273 | BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens OX=9606 GN=KCTD9 PE=1 SV=1 |
| Q80UN1 | BTB/POZ domain-containing protein KCTD9 OS=Mus musculus OX=10090 GN=Kctd9 PE=2 SV=1 |
| Q14681 | BTB/POZ domain-containing protein KCTD2 OS=Homo sapiens OX=9606 GN=KCTD2 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001748 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 adaptor Cullin RING|BTB · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11834 all species → | KHA | KHA, dimerisation domain of potassium ion channel | Family | Interproscan |
| PF00805 all species → | Pentapeptide | Pentapeptide repeats (8 copies) | Repeat | Interproscan |
| PF02214 all species → | BTB_2 | BTB/POZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR021789 all species → | Domain | KHA domain | Interproscan |
| IPR000210 all species → | Domain | BTB/POZ domain | Interproscan |
| IPR001646 all species → | Repeat | Pentapeptide repeat | Interproscan |
| IPR051082 all species → | Family | Pentapeptide repeat and BTB/POZ domain-containing protein | Interproscan |
| IPR011333 all species → | Homologous_superfamily | SKP1/BTB/POZ domain superfamily | Interproscan |
| IPR003131 all species → | Domain | Potassium channel tetramerisation-type BTB domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14136 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0051260 all species → | Biological Process | protein homooligomerization | Interproscan |
evm.model.Ap2.647.1.5f15ddec.Transcript abundance of evm.model.Ap2.647.1.5f15ddec across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
