Detailed information of evm.model.Ap2.832 in Astrangia poculata

Genomic Location: Ap2:8587016...8599512
NR annotation: XP_020616706.1, gastric intrinsic factor-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5FFY0Histidinol-phosphate aminotransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=hisC PE=3 SV=1
A6L2V8Histidinol-phosphate aminotransferase OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=hisC PE=3 SV=1
A0M287Histidinol-phosphate aminotransferase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=hisC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001572 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01122
all species →		Cobalamin_bindEukaryotic cobalamin-binding proteinRepeatInterproscan
PF00155
all species →		Aminotran_1_2Aminotransferase class I and IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001917
all species →		Binding_siteAminotransferase, class-II, pyridoxal-phosphate binding siteInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR002157
all species →		FamilyCobalamin (vitamin B12)-binding proteinInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR004839
all species →		DomainAminotransferase, class I/classIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42885
all species →		HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016740
all species →		Molecular Functiontransferase activityInterproscan
GO:0015889
all species →		Biological Processcobalamin transportInterproscan
GO:0031419
all species →		Molecular Functioncobalamin bindingInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.832.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP