Genomic Location: Ap2:8623576...8652883
NR annotation: RMX41243.1, hypothetical protein pdam_00012384 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap2.837.1.5f15de51 |
| Transcript |
| evm.model.Ap2.837.1.5f15de51 |
| Protein |
| evm.model.Ap2.837.1.5f15de51 |
| UniProt accession | Description |
|---|---|
| Q62824 | Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1 |
| O35382 | Exocyst complex component 4 OS=Mus musculus OX=10090 GN=Exoc4 PE=1 SV=2 |
| Q96A65 | Exocyst complex component 4 OS=Homo sapiens OX=9606 GN=EXOC4 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003014 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20652 all species → | Sec8_C | Exocyst complex component Sec8 C-terminal | Repeat | Interproscan |
| PF04048 all species → | Sec8_N | Exocyst complex component Sec8 N-terminal | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR048630 all species → | Domain | Exocyst complex component Sec8, middle helical bundle | Interproscan |
| IPR007191 all species → | Domain | Exocyst complex component Sec8, N-terminal | Interproscan |
| IPR039682 all species → | Family | Exocyst complex component Sec8/EXOC4 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14146 all species → | EXOCYST COMPLEX COMPONENT 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000145 all species → | Cellular Component | exocyst | Interproscan |
| GO:0006904 all species → | Biological Process | vesicle docking involved in exocytosis | Interproscan |
| GO:0006887 all species → | Biological Process | exocytosis | Interproscan |
| GO:0006893 all species → | Biological Process | Golgi to plasma membrane transport | Interproscan |
| GO:0007268 all species → | Biological Process | chemical synaptic transmission | Interproscan |
| GO:0032584 all species → | Cellular Component | growth cone membrane | Interproscan |
| GO:0045202 all species → | Cellular Component | synapse | Interproscan |
| GO:0090522 all species → | Biological Process | vesicle tethering involved in exocytosis | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06111 | EXOC4, SEC8; exocyst complex component 4 | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of evm.model.Ap2.837.1.5f15de51 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
