Detailed information of evm.model.Ap2.920 in Astrangia poculata

Genomic Location: Ap2:9451595...9462506
NR annotation: CAH3189541.1, unnamed protein product [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P85972Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1
P26234Vinculin OS=Sus scrofa OX=9823 GN=VCL PE=1 SV=4
Q64727Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003606 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01044
all species →		VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006077
all species →		FamilyVinculin/alpha-cateninInterproscan
IPR001033
all species →		FamilyAlpha-cateninInterproscan
IPR036723
all species →		Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18914
all species →		ALPHA CATENINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005912
all species →		Cellular Componentadherens junctionInterproscan
GO:0008013
all species →		Molecular Functionbeta-catenin bindingInterproscan
GO:0016342
all species →		Cellular Componentcatenin complexInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0045296
all species →		Molecular Functioncadherin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap2.920.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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