Genomic Location: Ap3:11104760...11120399
NR annotation: XP_022781545.1, rasGAP-activating-like protein 1 isoform X2 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.1008 |
| Transcript |
| evm.model.Ap3.1008 |
| Protein |
| evm.model.Ap3.1008 |
| UniProt accession | Description |
|---|---|
| O95294 | RasGAP-activating-like protein 1 OS=Homo sapiens OX=9606 GN=RASAL1 PE=1 SV=3 |
| Q9Z268 | RasGAP-activating-like protein 1 OS=Mus musculus OX=10090 GN=Rasal1 PE=1 SV=2 |
| Q6PFQ7 | Ras GTPase-activating protein 4 OS=Mus musculus OX=10090 GN=Rasa4 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006928 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00169 all species → | PH | PH domain | Domain | Interproscan |
| PF00616 all species → | RasGAP | GTPase-activator protein for Ras-like GTPase | Family | Interproscan |
| PF00779 all species → | BTK | BTK motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001936 all species → | Domain | Ras GTPase-activating domain | Interproscan |
| IPR023152 all species → | Conserved_site | Ras GTPase-activating protein, conserved site | Interproscan |
| IPR001849 all species → | Domain | Pleckstrin homology domain | Interproscan |
| IPR008936 all species → | Homologous_superfamily | Rho GTPase activation protein | Interproscan |
| IPR011993 all species → | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR001562 all species → | Conserved_site | Zinc finger, Btk motif | Interproscan |
| IPR039360 all species → | Family | Ras GTPase-activating protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10194 all species → | RAS GTPASE-ACTIVATING PROTEINS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0043087 all species → | Biological Process | regulation of GTPase activity | Interproscan |
| GO:0035556 all species → | Biological Process | intracellular signal transduction | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17632 | RASAL1; RAS protein activator-like 1 | - | Ras signaling pathway | ko04014 | deepkoala |
Transcript abundance of evm.model.Ap3.1008 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
