Detailed information of evm.model.Ap3.1023 in Astrangia poculata

Genomic Location: Ap3:11269382...11275198
NR annotation: XP_020601706.1, probable E3 ubiquitin-protein ligase DTX2 isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R3P2Probable E3 ubiquitin-protein ligase DTX2 OS=Mus musculus OX=10090 GN=Dtx2 PE=1 SV=2
Q86UW9Probable E3 ubiquitin-protein ligase DTX2 OS=Homo sapiens OX=9606 GN=DTX2 PE=1 SV=3
Q86Y01E3 ubiquitin-protein ligase DTX1 OS=Homo sapiens OX=9606 GN=DTX1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000869 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18102
all species →		DTCDeltex C-terminal domainDomainInterproscan
PF02825
all species →		WWEWWE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018123
all species →		DomainWWE domain, subgroupInterproscan
IPR039399
all species →		Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR004170
all species →		DomainWWE domainInterproscan
IPR037197
all species →		Homologous_superfamilyWWE domain superfamilyInterproscan
IPR039398
all species →		FamilyDeltex familyInterproscan
IPR039396
all species →		DomainDeltex, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12622
all species →		DELTEX-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0007219
all species →		Biological ProcessNotch signaling pathwayInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1023.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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