Gene detail

Detailed information of evm.model.Ap3.1239 in Astrangia poculata

Genomic Location: Ap3:13652033...13669305
NR annotation: KAJ7387926.1, hypothetical protein OS493_001278 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap3.1239

atggcgccgaaccgttcatgtcagacggaaacgatgatgatcgttcagccaactttgaaaccagctcagtttgaagagagccctttcaaagtggaaaaaacatcaaggataacgaggtgcagctctctcagctttagcgaagaagaagaaggctttgtgcttggaaggaccgaatatgttcgctcgctcgcctcatggaagaagacgacctcatgctcactgttcagtgtcgacatggggactctaaactctgaacgatggcctggcgttagttctggcctagacgaagatgaaaggcgagagaaagtgaaacaaagggtcgcaatggaactcgaggagaagaaagaagctgtggaaaatgacgacaagtccatttgctggcaacaacaaacagggcaaacattggacacatataagtttacagatgaaaagaagaacacatggaaatcaatgatactagagcttgaagcaaaacaactaaaggctgagaacaaagcaaaagaggatatacagtgttacgatcttttgacaattccatattctatacaagaaagtgttacagctcccgagtcgactcttcaacaagtggaaccaccttctacttcacctgacagctctgaagttcaagaaattttcccaacaaaagatgaagtatcctcaaatgatgattgggcagaagtgaaactagttgaagaattaaaattggatgaaaaagaaacacagcacaaaagtttattcagaagacatgctgttagaaaggtaaagagaagtatctggtccattatagaacctgatcctcctcctgtacagcgaaaaagaagagggaaaacacgcaaaacagttcagacaagaaagcccagacaacagaggaaccgtgcactcaaacagtcttttccttcaagtgatgagactaaagaatcaattacaattcaaaatgtgaaaccatcagcttcaaaaagaaaaagggccaactctcctgttaggaatgagccaaaagattctggcgttgacagtgatggcagcagtagtgggagtagtggtgggtataatggtagctctggaagaagcattggtaatttcccaggtgggaatggcagcactggaggctctggtgggcaaggaaatgcaggagatggtgacgaagacgataagaaaaaggagttaccttggtggtatcttcctggtggacaaaacaatgcagcaaacggcactggaaaaaagaaaaagacaaaagacgaagaagaagatcatgggggtgaggaaaagatggaggtggattatgttcctatttcaaagacaactggctttcagatgttcctacccagcaaagtagataacgcagaacagtgtcacagccctggagaagaggagccttcaactacaagtggaaagatatttgaaagtgtgcagggtgactttattttctccccccaagaccttcagcatgcatgttattgctccaatcttgtgtgtcataacataaaatgcaaacaggtgaaggcagaggtagatcacatgaaagtccataaggggtggaagctgtgtgaacgttgtgtaaatacaaggaacactgtgaaacaacatgcaaatgtttgtcgtaggacaggatgtcgtgttccagactgtgagagcttaaggagcaagaatgattgtaatgcagacattgatggagagccagtcctactgaagttcagaaaagtgtctccacctgctgtcccacagcagtttgcttggatgccacccaggactctctactgcacaccactgacaacaaatcaaattgatggcaaagtgatattccggaactcaacactgctgcctgagacctattttgcagaacacattgactacaatgtgattagaaggaacaaacttggtaatggttccaatggaaacatttactctatttgcatgcaatcagacatgaacaaaaaaatggcattgaaggagactaattatcctattcccaaggaggaagtagaagtttataaggctttaggagaacatgagcacattgtagctcactatggaggaacattcaaaggcagtcacggacatgccaatatatttatggaaaagtgtgaacaatcactttatcagcatatggaggcaatgcaacgccgactaacagtggatgaagccatgttttattggctacaaatacatgatgcggttgagtatttgcacaatttgcctgagccagtgattcacaaagatatcaaggccaaaaatgtgttgctcactgcagaaggttcacgggccaaactggcagactttgactcagctaagagactcccacatgagttgactgaggcaggactcaaacctcttggtacaaagggatttgcctctcctgaggttttggaaaagaaacctcatggtagaccagctgatgtgtacagtttagcatgttttttgcttgaattaactgttggagttccatctaaggagacattgcgggcaaagattgagagtttgcaggaattaaatcctgacttggccctgatggtacaggcatgtgtcacgtacaaaccagaagagcgacccactgctcgtggactgttagagtggccagttattcagaggtttaaaactggacaatctttttag

Transcript

evm.model.Ap3.1239

ATGGCGCCGAACCGTTCATGTCAGACGGAAACGATGATGATCGTTCAGCCAACTTTGAAACCAGCTCAGTTTGAAGAGAGCCCTTTCAAAGTGGAAAAAACATCAAGGATAACGAGGTGCAGCTCTCTCAGCTTTAGCGAAGAAGAAGAAGGCTTTGTGCTTGGAAGGACCGAATATGTTCGCTCGCTCGCCTCATGGAAGAAGACGACCTCATGCTCACTGTTCAGTGTCGACATGGGGACTCTAAACTCTGAACGATGGCCTGGCGTTAGTTCTGGCCTAGACGAAGATGAAAGGCGAGAGAAAGTGAAACAAAGGGTCGCAATGGAACTCGAGGAGAAGAAAGAAGCTGTGGAAAATGACGACAAGTCCATTTGCTGGCAACAACAAACAGGGCAAACATTGGACACATATAAGTTTACAGATGAAAAGAAGAACACATGGAAATCAATGATACTAGAGCTTGAAGCAAAACAACTAAAGGCTGAGAACAAAGCAAAAGAGGATATACAGTGTTACGATCTTTTGACAATTCCATATTCTATACAAGAAAGTGTTACAGCTCCCGAGTCGACTCTTCAACAAGTGGAACCACCTTCTACTTCACCTGACAGCTCTGAAGTTCAAGAAATTTTCCCAACAAAAGATGAAGTATCCTCAAATGATGATTGGGCAGAAGTGAAACTAGTTGAAGAATTAAAATTGGATGAAAAAGAAACACAGCACAAAAGTTTATTCAGAAGACATGCTGTTAGAAAGGTAAAGAGAAGTATCTGGTCCATTATAGAACCTGATCCTCCTCCTGTACAGCGAAAAAGAAGAGGGAAAACACGCAAAACAGTTCAGACAAGAAAGCCCAGACAACAGAGGAACCGTGCACTCAAACAGTCTTTTCCTTCAAGTGATGAGACTAAAGAATCAATTACAATTCAAAATGTGAAACCATCAGCTTCAAAAAGAAAAAGGGCCAACTCTCCTGTTAGGAATGAGCCAAAAGATTCTGGCGTTGACAGTGATGGCAGCAGTAGTGGGAGTAGTGGTGGGTATAATGGTAGCTCTGGAAGAAGCATTGGTAATTTCCCAGGTGGGAATGGCAGCACTGGAGGCTCTGGTGGGCAAGGAAATGCAGGAGATGGTGACGAAGACGATAAGAAAAAGGAGTTACCTTGGTGGTATCTTCCTGGTGGACAAAACAATGCAGCAAACGGCACTGGAAAAAAGAAAAAGACAAAAGACGAAGAAGAAGATCATGGGGGTGAGGAAAAGATGGAGGTGGATTATGTTCCTATTTCAAAGACAACTGGCTTTCAGATGTTCCTACCCAGCAAAGTAGATAACGCAGAACAGTGTCACAGCCCTGGAGAAGAGGAGCCTTCAACTACAAGTGGAAAGATATTTGAAAGTGTGCAGGGTGACTTTATTTTCTCCCCCCAAGACCTTCAGCATGCATGTTATTGCTCCAATCTTGTGTGTCATAACATAAAATGCAAACAGGTGAAGGCAGAGGTAGATCACATGAAAGTCCATAAGGGGTGGAAGCTGTGTGAACGTTGTGTAAATACAAGGAACACTGTGAAACAACATGCAAATGTTTGTCGTAGGACAGGATGTCGTGTTCCAGACTGTGAGAGCTTAAGGAGCAAGAATGATTGTAATGCAGACATTGATGGAGAGCCAGTCCTACTGAAGTTCAGAAAAGTGTCTCCACCTGCTGTCCCACAGCAGTTTGCTTGGATGCCACCCAGGACTCTCTACTGCACACCACTGACAACAAATCAAATTGATGGCAAAGTGATATTCCGGAACTCAACACTGCTGCCTGAGACCTATTTTGCAGAACACATTGACTACAATGTGATTAGAAGGAACAAACTTGGTAATGGTTCCAATGGAAACATTTACTCTATTTGCATGCAATCAGACATGAACAAAAAAATGGCATTGAAGGAGACTAATTATCCTATTCCCAAGGAGGAAGTAGAAGTTTATAAGGCTTTAGGAGAACATGAGCACATTGTAGCTCACTATGGAGGAACATTCAAAGGCAGTCACGGACATGCCAATATATTTATGGAAAAGTGTGAACAATCACTTTATCAGCATATGGAGGCAATGCAACGCCGACTAACAGTGGATGAAGCCATGTTTTATTGGCTACAAATACATGATGCGGTTGAGTATTTGCACAATTTGCCTGAGCCAGTGATTCACAAAGATATCAAGGCCAAAAATGTGTTGCTCACTGCAGAAGGTTCACGGGCCAAACTGGCAGACTTTGACTCAGCTAAGAGACTCCCACATGAGTTGACTGAGGCAGGACTCAAACCTCTTGGTACAAAGGGATTTGCCTCTCCTGAGGTTTTGGAAAAGAAACCTCATGGTAGACCAGCTGATGTGTACAGTTTAGCATGTTTTTTGCTTGAATTAACTGTTGGAGTTCCATCTAAGGAGACATTGCGGGCAAAGATTGAGAGTTTGCAGGAATTAAATCCTGACTTGGCCCTGATGGTACAGGCATGTGTCACGTACAAACCAGAAGAGCGACCCACTGCTCGTGGACTGTTAGAGTGGCCAGTTATTCAGAGGTTTAAAACTGGACAATCTTTTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2U5	Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens OX=9606 GN=MAP3K2 PE=1 SV=2
Q61083	Mitogen-activated protein kinase kinase kinase 2 OS=Mus musculus OX=10090 GN=Map3k2 PE=1 SV=2
Q54PX0	Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284251 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004807 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR035898 all species →	Homologous_superfamily	TAZ domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050538 all species →	Family	Mitogen-activated protein kinase kinase kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000197 all species →	Domain	Zinc finger, TAZ-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016 all species →	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap3.1239.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.