Detailed information of evm.model.Ap3.1247_evm.model.Ap3.1249 in Astrangia poculata

Genomic Location: Ap3:13815039...13878603
NR annotation: CAH3108485.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96ES7SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1
Q9DA08SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=1 SV=1
P0C606SAGA-associated factor 29 OS=Rattus norvegicus OX=10116 GN=Sgf29 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006602 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07039
all species →		SGF29_TudorSGF29 tudor-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037802
all species →		FamilySAGA-associated factor 29Interproscan
IPR010750
all species →		DomainSGF29 tudor-like domainInterproscan
IPR047287
all species →		DomainSAGA-associated factor 29, second Tudor domainInterproscan
IPR047288
all species →		DomainSAGA-associated factor 29, first Tudor domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21539
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000124
all species →		Cellular ComponentSAGA complexInterproscan
GO:0035064
all species →		Molecular Functionmethylated histone bindingInterproscan
GO:0043966
all species →		Biological Processobsolete histone H3 acetylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11364SGF29; SAGA-associated factor 29-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP