Gene detail

Detailed information of evm.model.Ap3.1275 in Astrangia poculata

Genomic Location: Ap3:14230794...14312393
NR annotation: XP_020616329.1, NADPH--cytochrome P450 reductase-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap3.1275

atgtcatcagctgacgtagcagagaaatccctggttgggacagtcgacatcgtcttgttggcttcctttatcggagtgttactgtactggttttgtggacgaagaaagaagacagagagtgcagctcttacccagaaattggtcttggcaccaacatctaaggtttcccatgaggacacaagtttcattggaaaaatgaaaaaatctggaaaatctatagcaatattctatggttctcaaactgggacagctgaggagtttgcaggtcgcttggcaaaggatgttcagcgttatgggttaaaagcccttgtgttagatccagaggagtgtgacatggaagaacttactcgcatgggagaagttgaaaatgcaatgactatctttgtagttgctacatatggtgaaggtgaccccactgataatgcacaggagttctatgaatggttacaaaatgacagagatgacctggactgcctcaattatactgtctttggtcttggaaacaagacatatgaacactacaattcaatgggaagatttgtggataaacgtcttgaagagatgggagcaaagcgagtttttgagaggggagagggagatgatgatggaaatttggaagaggactttgtaagatggagagaggcattttggcctgcagtgctaagcaaatataacattgatgtccgagaaatcaagaggagactgtcatcttgtattgaacgtcagtttaaacttgtcattcataaagatttacctcaagacaaactttacattggggagatgaataaacttaagtcgtatatcacccaacgcccgccttttgatgctaagaaccctttcttggctccagtacttgtgaatcgtgagctgcacaaagctggtaatcgatcctgtatgcatattgaacttgatatcactggctccaaaatcaagtatgatgcaggagatcatgtggctgtttatcctactaacagctctgaacttgtggaaaaacttgggagcttattaaaaatggaccttgatacagtcatctcacttaataatacagatgaggactcacccaagaaacacccttttccttgtcctacaacatatcggactgccttgctgcattatgtggacgttgccagtgtagttaagactcatgttctgagagagttggctgaatatgcaaaggattttgaacacaaagaattccttatgaacatcacagatactacagaggaggccaaaaaacaatatcaagagtgggttttaaacccacaccggcatattgtagcagtattggaggatctttcctcactgaggccacccctggatcacttattggaactgttacctagactgcagtgccgctactactccatctcgtcatcacctaagatgtacccaacttccattcacatcactgcagtacttgtaaggtggacaacttctactgatcgggttcaacatggtgttgctactaactggcttgctaccaagaaccctaaagaaggtgaaacttgctgcattccaatctttgttcgcaaaacccagtttcgcctgcctttcaagtcagtgactcctgtcataatggtcggcccgggtactggctttgctcccttcagaggcttcatccaagataggcacatacagaaatccagtgggaaagctgtaggtgacatgatgttgttttttggctgtcgtaagaagagcgaagactacatttacgaggatgaactgttgtcatattcacaacatggtaccattgccaaattgcatgtggctttttcaagagaccaagaaaagaagatctatgtgaccaaccttatggcagagaataaggaagccatttggaaggttttggacaatggagggcacatttatgtttgtggtgacgctcggaacatggcacgtgatgttcataacctgttggtgacgatcgtcaaggaaaatggcggcatgtctgagaatgaagcgattgattacgtcaagaaactcagtgccaagggcagatattcagttgatgtttggagctaa

Transcript

evm.model.Ap3.1275

ATGTCATCAGCTGACGTAGCAGAGAAATCCCTGGTTGGGACAGTCGACATCGTCTTGTTGGCTTCCTTTATCGGAGTGTTACTGTACTGGTTTTGTGGACGAAGAAAGAAGACAGAGAGTGCAGCTCTTACCCAGAAATTGGTCTTGGCACCAACATCTAAGGTTTCCCATGAGGACACAAGTTTCATTGGAAAAATGAAAAAATCTGGAAAATCTATAGCAATATTCTATGGTTCTCAAACTGGGACAGCTGAGGAGTTTGCAGGTCGCTTGGCAAAGGATGTTCAGCGTTATGGGTTAAAAGCCCTTGTGTTAGATCCAGAGGAGTGTGACATGGAAGAACTTACTCGCATGGGAGAAGTTGAAAATGCAATGACTATCTTTGTAGTTGCTACATATGGTGAAGGTGACCCCACTGATAATGCACAGGAGTTCTATGAATGGTTACAAAATGACAGAGATGACCTGGACTGCCTCAATTATACTGTCTTTGGTCTTGGAAACAAGACATATGAACACTACAATTCAATGGGAAGATTTGTGGATAAACGTCTTGAAGAGATGGGAGCAAAGCGAGTTTTTGAGAGGGGAGAGGGAGATGATGATGGAAATTTGGAAGAGGACTTTGTAAGATGGAGAGAGGCATTTTGGCCTGCAGTGCTAAGCAAATATAACATTGATGTCCGAGAAATCAAGAGGAGACTGTCATCTTGTATTGAACGTCAGTTTAAACTTGTCATTCATAAAGATTTACCTCAAGACAAACTTTACATTGGGGAGATGAATAAACTTAAGTCGTATATCACCCAACGCCCGCCTTTTGATGCTAAGAACCCTTTCTTGGCTCCAGTACTTGTGAATCGTGAGCTGCACAAAGCTGGTAATCGATCCTGTATGCATATTGAACTTGATATCACTGGCTCCAAAATCAAGTATGATGCAGGAGATCATGTGGCTGTTTATCCTACTAACAGCTCTGAACTTGTGGAAAAACTTGGGAGCTTATTAAAAATGGACCTTGATACAGTCATCTCACTTAATAATACAGATGAGGACTCACCCAAGAAACACCCTTTTCCTTGTCCTACAACATATCGGACTGCCTTGCTGCATTATGTGGACGTTGCCAGTGTAGTTAAGACTCATGTTCTGAGAGAGTTGGCTGAATATGCAAAGGATTTTGAACACAAAGAATTCCTTATGAACATCACAGATACTACAGAGGAGGCCAAAAAACAATATCAAGAGTGGGTTTTAAACCCACACCGGCATATTGTAGCAGTATTGGAGGATCTTTCCTCACTGAGGCCACCCCTGGATCACTTATTGGAACTGTTACCTAGACTGCAGTGCCGCTACTACTCCATCTCGTCATCACCTAAGATGTACCCAACTTCCATTCACATCACTGCAGTACTTGTAAGGTGGACAACTTCTACTGATCGGGTTCAACATGGTGTTGCTACTAACTGGCTTGCTACCAAGAACCCTAAAGAAGGTGAAACTTGCTGCATTCCAATCTTTGTTCGCAAAACCCAGTTTCGCCTGCCTTTCAAGTCAGTGACTCCTGTCATAATGGTCGGCCCGGGTACTGGCTTTGCTCCCTTCAGAGGCTTCATCCAAGATAGGCACATACAGAAATCCAGTGGGAAAGCTGTAGGTGACATGATGTTGTTTTTTGGCTGTCGTAAGAAGAGCGAAGACTACATTTACGAGGATGAACTGTTGTCATATTCACAACATGGTACCATTGCCAAATTGCATGTGGCTTTTTCAAGAGACCAAGAAAAGAAGATCTATGTGACCAACCTTATGGCAGAGAATAAGGAAGCCATTTGGAAGGTTTTGGACAATGGAGGGCACATTTATGTTTGTGGTGACGCTCGGAACATGGCACGTGATGTTCATAACCTGTTGGTGACGATCGTCAAGGAAAATGGCGGCATGTCTGAGAATGAAGCGATTGATTACGTCAAGAAACTCAGTGCCAAGGGCAGATATTCAGTTGATGTTTGGAGCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q07994	NADPH--cytochrome P450 reductase OS=Musca domestica OX=7370 PE=2 SV=1
Q27597	NADPH--cytochrome P450 reductase OS=Drosophila melanogaster OX=7227 GN=Cpr PE=1 SV=2
P16435	NADPH--cytochrome P450 reductase OS=Homo sapiens OX=9606 GN=POR PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001660 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00258 all species →	Flavodoxin_1	Flavodoxin	Domain	Interproscan
PF00667 all species →	FAD_binding_1	FAD binding domain	Domain	Interproscan
PF00175 all species →	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001709 all species →	Domain	Flavoprotein pyridine nucleotide cytochrome reductase	Interproscan
IPR029039 all species →	Homologous_superfamily	Flavoprotein-like superfamily	Interproscan
IPR001094 all species →	Domain	Flavodoxin-like	Interproscan
IPR008254 all species →	Domain	Flavodoxin/nitric oxide synthase	Interproscan
IPR039261 all species →	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR003097 all species →	Domain	Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding	Interproscan
IPR001433 all species →	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR023173 all species →	Homologous_superfamily	NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily	Interproscan
IPR017938 all species →	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR017927 all species →	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR023208 all species →	Family	NADPH-cytochrome P450 reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19384 all species →	NITRIC OXIDE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003958 all species →	Molecular Function	NADPH-hemoprotein reductase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0009725 all species →	Biological Process	response to hormone	Interproscan
GO:0010181 all species →	Molecular Function	FMN binding	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00327	POR; NADPH-ferrihemoprotein reductase	EC:1.6.2.4	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.